RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 NELFEP18615 380 aaKnown RBP21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 TLX1P31314 330 aaPredicted RBP21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 SOAT1P35610 550 aa21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 CDK9P50750 372 aaKnown RBP21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 DUSP2Q05923 314 aa21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 HSPB3Q12988 150 aa21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 CYP51A1Q16850 503 aa21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 NIPAL1Q6NVV3 410 aa21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 ZNF574Q6ZN55 896 aaPredicted RBP21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 RNF111Q6ZNA4 994 aa21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 OR52N2Q8NGI0 321 aa21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 ZFP28Q8NHY6 868 aa21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 SUN3Q8TAQ9 357 aa21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 N4BP2L2Q92802 583 aaPredicted RBP21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 LRRN3Q9H3W5 708 aa21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 GORASP2Q9H8Y8 452 aa21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 PDP2Q9P2J9 529 aa21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 ANGPTL2Q9UKU9 493 aa21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 PSME2Q9UL46 239 aa21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 ATXN7L1Q9ULK2 861 aaPredicted RBP21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 PCDHGB2Q9Y5G2 931 aa21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 SPACA6W5XKT8 324 aa21.6■■□□□ 1.05
SMARCB1-201ENST00000263121 A8MU76 341 aa21.59■■□□□ 1.05
SMARCB1-201ENST00000263121 CYR61O00622 381 aa21.59■■□□□ 1.05
SMARCB1-201ENST00000263121 RDH16O75452 317 aa21.59■■□□□ 1.05
SMARCB1-201ENST00000263121 NTRK1P04629 796 aa21.59■■□□□ 1.05
SMARCB1-201ENST00000263121 NCBP2P52298 156 aaKnown RBP eCLIP21.59■■□□□ 1.053e-7■■□□□ 13.9
SMARCB1-201ENST00000263121 POLE2P56282 527 aa21.59■■□□□ 1.05
SMARCB1-201ENST00000263121 SKP1P63208 163 aa21.59■■□□□ 1.05
SMARCB1-201ENST00000263121 ZNF750Q32MQ0 723 aa21.59■■□□□ 1.05
SMARCB1-201ENST00000263121 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.59■■□□□ 1.056e-15■□□□□ 9.2
SMARCB1-201ENST00000263121 DBX2Q6ZNG2 339 aa21.59■■□□□ 1.05
SMARCB1-201ENST00000263121 PTOV1Q86YD1 416 aa21.59■■□□□ 1.05
SMARCB1-201ENST00000263121 ZZZ3Q8IYH5 903 aa21.59■■□□□ 1.05
SMARCB1-201ENST00000263121 OR5AK3PQ8NH89 298 aa21.59■■□□□ 1.05
SMARCB1-201ENST00000263121 IFI44Q8TCB0 444 aa21.59■■□□□ 1.05
SMARCB1-201ENST00000263121 GIMAP4Q9NUV9 329 aa21.59■■□□□ 1.05
SMARCB1-201ENST00000263121 VPS13AQ96RL7 3174 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 A0A0A6YYC8 382 aaPredicted RBP21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 RNF103-CHMP3A0A140T963 221 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 A0A1W2PS29 197 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 I3L1I5 382 aaPredicted RBP21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 GSTA4O15217 222 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 NSA2O95478 260 aaKnown RBP21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 KRT75O95678 551 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 ANKRD34CP0C6C1 535 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 CSNK2A2P19784 350 aaPredicted RBP21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 CHI3L1P36222 383 aaPredicted RBP21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 DUSP3P51452 185 aaPredicted RBP21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 RAB38P57729 211 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 VAC14Q08AM6 782 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 SPIDRQ14159 915 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 GRM7Q14831 915 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 GPR19Q15760 415 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 ADRM1Q16186 407 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 TMTC4Q5T4D3 741 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 SAXO2Q658L1 398 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 LAIR1Q6GTX8 287 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 SHISA5Q8N114 240 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 OR4D9Q8NGE8 314 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 SLCO4A1Q96BD0 722 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 NEURL3Q96EH8 262 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 NSMCE2Q96MF7 247 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 IRAK4Q9NWZ3 460 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 SNX8Q9Y5X2 465 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 ZNF780BQ9Y6R6 833 aa21.58■■□□□ 1.05
SMARCB1-201ENST00000263121 LNP1A1A4G5 178 aa21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 PRR33A8MZF0 331 aa21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 CXCR6O00574 342 aa21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 C8orf89P0DMQ9 161 aa21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 FOLR1P15328 257 aa21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 SLC7A1P30825 629 aa21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 SIM1P81133 766 aaPredicted RBP21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 SHC2P98077 582 aa21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 DAB2P98082 770 aa21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 FADDQ13158 208 aa21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 COX20Q5RI15 118 aa21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 IRAK1BP1Q5VVH5 260 aa21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 ERICH5Q6P6B1 374 aa21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 TTC29Q8NA56 475 aaPredicted RBP21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 OR52E4Q8NGH9 312 aa21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 FIG4Q92562 907 aa21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 DPYSL5Q9BPU6 564 aa21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 DPH2Q9BQC3 489 aaPredicted RBP21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 TMEM121BQ9BXQ6 578 aaPredicted RBP21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 RAD21L1Q9H4I0 556 aa21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 STOML1Q9UBI4 398 aa21.57■■□□□ 1.04
SMARCB1-201ENST00000263121 TMEM150CB9EJG8 249 aa21.56■■□□□ 1.04
SMARCB1-201ENST00000263121 GMNNO75496 209 aa21.56■■□□□ 1.04
SMARCB1-201ENST00000263121 BAG2O95816 211 aa21.56■■□□□ 1.04
SMARCB1-201ENST00000263121 FEN1P39748 380 aaKnown RBP21.56■■□□□ 1.04
SMARCB1-201ENST00000263121 VMACQ2NL98 169 aa21.56■■□□□ 1.04
SMARCB1-201ENST00000263121 MTX3Q5HYI7 312 aa21.56■■□□□ 1.04
SMARCB1-201ENST00000263121 ARHGAP22Q7Z5H3 698 aa21.56■■□□□ 1.04
SMARCB1-201ENST00000263121 CCDC116Q8IYX3 515 aa21.56■■□□□ 1.04
SMARCB1-201ENST00000263121 SAMD14Q8IZD0 417 aaPredicted RBP21.56■■□□□ 1.04
SMARCB1-201ENST00000263121 TMEM52Q8NDY8 209 aa21.56■■□□□ 1.04
SMARCB1-201ENST00000263121 OR4K14Q8NGD5 310 aa21.56■■□□□ 1.04
SMARCB1-201ENST00000263121 CANT1Q8WVQ1 401 aa21.56■■□□□ 1.04
SMARCB1-201ENST00000263121 CLK4Q9HAZ1 481 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms