RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 PRKG2Q13237 762 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 LAPTM5Q13571 262 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 RCAN2Q14206 197 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 KIAA0040Q15053 153 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 MMEL1Q495T6 779 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 C10orf62Q5T681 223 aaPredicted RBP12.55□□□□□ -0.4
SGCA-201ENST00000262018 PRAMEF13Q5VWM6 474 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 MLIPQ5VWP3 458 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 B3GNTL1Q67FW5 361 aaPredicted RBP12.55□□□□□ -0.4
SGCA-201ENST00000262018 FCRL6Q6DN72 434 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 NXPE4Q6UWF7 544 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 NET1Q7Z628 596 aaPredicted RBP12.55□□□□□ -0.4
SGCA-201ENST00000262018 OR52E1Q8NGJ3 308 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 SLC5A11Q8WWX8 675 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 LCN9Q8WX39 176 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 NANOS1Q8WY41 292 aaKnown RBP12.55□□□□□ -0.4
SGCA-201ENST00000262018 ROPN1LQ96C74 230 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 CLPTM1LQ96KA5 538 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 FCRL1Q96LA6 429 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 EFCAB11Q9BUY7 163 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 SLC7A5P2Q9GIP4 190 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 PCBD2Q9H0N5 130 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 WDR41Q9HAD4 459 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 BRF2Q9HAW0 419 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 FANCEQ9HB96 536 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 MCCC2Q9HCC0 563 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 SLC7A8Q9UHI5 535 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 SH3BGRL2Q9UJC5 107 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 PLAGL1Q9UM63 463 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 SH2B3Q9UQQ2 575 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 TMED5Q9Y3A6 229 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 DYTNA2CJ06 578 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 SEC22BO75396 215 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 KLF7O75840 302 aaPredicted RBP12.54□□□□□ -0.4
SGCA-201ENST00000262018 G6PDP11413 515 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 JAK1P23458 1154 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 IL12AP29459 219 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 SHMT2P34897 504 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 KIR3DL1P43629 444 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 POLR2JP52435 117 aaKnown RBP12.54□□□□□ -0.4
SGCA-201ENST00000262018 MTTPP55157 894 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 SOX8P57073 446 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 PAGE2BQ5JRK9 111 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 CATSPEREQ5SY80 951 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 C8orf82Q6P1X6 216 aaPredicted RBP12.54□□□□□ -0.4
SGCA-201ENST00000262018 MED27Q6P2C8 311 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 MTFR2Q6P444 385 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 SUSD1Q6UWL2 747 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 GFRALQ6UXV0 394 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 TMPRSS11BQ86T26 416 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 RETREG3Q86VR2 466 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 LAS2Q8IYD9 372 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 FBXW8Q8N3Y1 598 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 RAB42Q8N4Z0 105 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 LMNTD1Q8N9Z9 388 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 PROKR1Q8TCW9 393 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 SMPDL3AQ92484 453 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 JADE3Q92613 823 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 REPS1Q96D71 796 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 SPDL1Q96EA4 605 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 METTL2AQ96IZ6 378 aaKnown RBP12.54□□□□□ -0.4
SGCA-201ENST00000262018 TEX37Q96LM6 180 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 RAB11FIP5Q9BXF6 653 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 SRMSQ9H3Y6 488 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 RNPEPL1Q9HAU8 725 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 PTRH2Q9Y3E5 179 aaKnown RBP12.54□□□□□ -0.4
SGCA-201ENST00000262018 TSC22D4Q9Y3Q8 395 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 SEC16AO15027 2179 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 A0A1W2PP18 115 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 A0A1W2PPV9 198 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 PCDH17O14917 1159 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 PRPS2P11908 318 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 AGXTP21549 392 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 MAPK1P28482 360 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 PKLRP30613 574 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 GCKP35557 465 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 FOLR3P41439 243 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 TSTA3Q13630 321 aaPredicted RBP12.54□□□□□ -0.4
SGCA-201ENST00000262018 HIST2H2ACQ16777 129 aaPredicted RBP12.54□□□□□ -0.4
SGCA-201ENST00000262018 VPS26BQ4G0F5 336 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 WLSQ5T9L3 541 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 HIST2H2AA3Q6FI13 130 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 XKRXQ6PP77 449 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 AMIGO1Q86WK6 493 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 OOSP2Q86WS3 158 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 PCYOX1LQ8NBM8 494 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 OR7G3Q8NG95 312 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 OR4E2Q8NGC2 313 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 OR2L8Q8NGY9 312 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 OR1L3Q8NH93 324 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 WDR60Q8WVS4 1066 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 STMN2Q93045 179 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 PPM1MQ96MI6 270 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 SERPINI1Q99574 410 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 PELI2Q9HAT8 420 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 HRASLS2Q9NWW9 162 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 OR6C2Q9NZP2 312 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 STOML1Q9UBI4 398 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 ICKQ9UPZ9 632 aa12.54□□□□□ -0.4
SGCA-201ENST00000262018 OR6C74A6NCV1 312 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms