RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 SLC12A4Q9UP95 1085 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 PADI2Q9Y2J8 665 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 WBP11Q9Y2W2 641 aaKnown RBP10.9□□□□□ -0.66
PFDN1-201ENST00000261813 CCL27Q9Y4X3 112 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 HRH3Q9Y5N1 445 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 FLNBO75369 2602 aaKnown RBP10.9□□□□□ -0.66
PFDN1-201ENST00000261813 HNRNPCL1O60812 293 aaKnown RBP10.9□□□□□ -0.67
PFDN1-201ENST00000261813 SCELO95171 688 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 BMP10O95393 424 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 RECKO95980 971 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 PRKAR1AP10644 381 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 DDX5P17844 614 aaKnown RBP10.9□□□□□ -0.67
PFDN1-201ENST00000261813 ATP5A1P25705 553 aaKnown RBP10.9□□□□□ -0.67
PFDN1-201ENST00000261813 FOLR3P41439 243 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 TSFMP43897 325 aaKnown RBP10.9□□□□□ -0.67
PFDN1-201ENST00000261813 GSTM5P46439 218 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 MNAT1P51948 309 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 MTTPP55157 894 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 SKP1P63208 163 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 KLC1Q07866 573 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 ACSM2AQ08AH3 577 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 CDC20Q12834 499 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 KRT72Q14CN4 511 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 MAPRE2Q15555 327 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 GALNTL6Q49A17 601 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 CRTC2Q53ET0 693 aaPredicted RBP10.9□□□□□ -0.67
PFDN1-201ENST00000261813 ACSM2BQ68CK6 577 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 SCIMPQ6UWF3 145 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 C6orf89Q6UWU4 347 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 CLNKQ7Z7G1 428 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 ZNF605Q86T29 641 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 MIER2Q8N344 545 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 SNRNP27Q8WVK2 155 aaKnown RBP10.9□□□□□ -0.67
PFDN1-201ENST00000261813 RGMAQ96B86 450 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 CMTM5Q96DZ9 223 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 SERINC2Q96SA4 455 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 TBCDQ9BTW9 1192 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 RBCK1Q9BYM8 510 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 ACPTQ9BZG2 426 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 ROGDIQ9GZN7 287 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 MYLK2Q9H1R3 596 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 PRORYQ9H606 182 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 COPS7BQ9H9Q2 264 aaPredicted RBP10.9□□□□□ -0.67
PFDN1-201ENST00000261813 C14orf105Q9NVL8 296 aa10.9□□□□□ -0.67
PFDN1-201ENST00000261813 NXT1Q9UKK6 140 aaKnown RBP10.9□□□□□ -0.67
PFDN1-201ENST00000261813 HELZ2Q9BYK8 2649 aaKnown RBP10.89□□□□□ -0.67
PFDN1-201ENST00000261813 PCSK5Q92824 1860 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 A0A088AWK7 358 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 DYTNA2CJ06 578 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 CDC14CA4D256 554 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 B3GALT2O43825 422 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 PRB1P04280 392 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 ZNF10P21506 573 aaPredicted RBP10.89□□□□□ -0.67
PFDN1-201ENST00000261813 HIST1H1TP22492 207 aaPredicted RBP10.89□□□□□ -0.67
PFDN1-201ENST00000261813 PRDX6P30041 224 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 BSGP35613 385 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 SSR2P43308 183 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 RAP1GDS1P52306 607 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 MC1RQ01726 317 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 TBL3Q12788 808 aaKnown RBP10.89□□□□□ -0.67
PFDN1-201ENST00000261813 ZSCAN26Q16670 478 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 UGT8Q16880 541 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 PDCD4Q53EL6 469 aaKnown RBP10.89□□□□□ -0.67
PFDN1-201ENST00000261813 OR4C11Q6IEV9 310 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 GALNT18Q6P9A2 607 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 CCDC121Q6ZUS5 278 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 YTHDF3Q7Z739 585 aaKnown RBP10.89□□□□□ -0.67
PFDN1-201ENST00000261813 FITM2Q8N6M3 262 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 ACOT4Q8N9L9 421 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 ZSCAN1Q8NBB4 408 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 OR2T11Q8NH01 316 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 ERP27Q96DN0 273 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 MESP1Q9BRJ9 268 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 CRB3Q9BUF7 120 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 NPLQ9BXD5 320 aaPredicted RBP10.89□□□□□ -0.67
PFDN1-201ENST00000261813 MRPL1Q9BYD6 325 aaKnown RBP10.89□□□□□ -0.67
PFDN1-201ENST00000261813 GRIP2Q9C0E4 1043 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 NMUR2Q9GZQ4 415 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 CLK4Q9HAZ1 481 aaKnown RBP10.89□□□□□ -0.67
PFDN1-201ENST00000261813 LANCL2Q9NS86 450 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 ZIM2Q9NZV7 527 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 ADAM29Q9UKF5 820 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 DAPP1Q9UN19 280 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 CAPN7Q9Y6W3 813 aa10.89□□□□□ -0.67
PFDN1-201ENST00000261813 ASH1LQ9NR48 2969 aaKnown RBP10.88□□□□□ -0.67
PFDN1-201ENST00000261813 SCN3AQ9NY46 2000 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 ARHGAP10A1A4S6 786 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 OR2W5A6NFC9 320 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 IDSB3KWA1 339 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 FAM227AF5H4B4 570 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 PSMD12O00232 456 aaPredicted RBP10.88□□□□□ -0.67
PFDN1-201ENST00000261813 TMPRSS11DO60235 418 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 PRMT3O60678 531 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 GUCY1B2O75343 617 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 EEDO75530 441 aaKnown RBP10.88□□□□□ -0.67
PFDN1-201ENST00000261813 FHP07954 510 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 RNH1P13489 461 aaKnown RBP10.88□□□□□ -0.67
PFDN1-201ENST00000261813 OTX2P32243 289 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 ASMTP46597 345 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 RASSF2P50749 326 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms