RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 ARF3P61204 181 aaPredicted RBP16.5■□□□□ 0.23
SRSF1-201ENST00000258962 HBA1P69905 142 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 SLAMF1Q13291 335 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 TRA2AQ13595 282 aaKnown RBP eCLIP16.5■□□□□ 0.235e-10■□□□□ 8.1
SRSF1-201ENST00000258962 WLSQ5T9L3 541 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 KLHL35Q6PF15 583 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 LRRC74BQ6ZQY2 392 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 TMPRSS9Q7Z410 1059 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 PLXDC1Q8IUK5 500 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 AQP12AQ8IXF9 295 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 DTWD1Q8N5C7 304 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 OR2T12Q8NG77 320 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 SMIM10Q96HG1 83 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 TRIM4Q9C037 500 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 FAM60AQ9NP50 221 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 SLAMF7Q9NQ25 335 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 GMEB1Q9Y692 573 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 AKAP13Q12802 2813 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 PLD2O14939 933 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 HCRTR1O43613 425 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 BRINP1O60477 761 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 JMJD7P0C870 316 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 GGT1P19440 569 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 CDH3P22223 829 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 CSF2RBP32927 897 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 CFHR1Q03591 330 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 SLC9A5Q14940 896 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 SNAP47Q5SQN1 464 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 FAM180BQ6P0A1 224 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 ZNF574Q6ZN55 896 aaPredicted RBP16.5■□□□□ 0.23
SRSF1-201ENST00000258962 CLEC4FQ8N1N0 589 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 C19orf47Q8N9M1 422 aaKnown RBP16.5■□□□□ 0.23
SRSF1-201ENST00000258962 FAM120BQ96EK7 910 aaKnown RBP16.5■□□□□ 0.23
SRSF1-201ENST00000258962 CCDC74BQ96LY2 380 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 RPF2Q9H7B2 306 aaKnown RBP16.5■□□□□ 0.23
SRSF1-201ENST00000258962 C5AR2Q9P296 337 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 MAGEL2Q9UJ55 1249 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 VPS4AQ9UN37 437 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 C15orf41Q9Y2V0 281 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 PCDHGA8Q9Y5G5 932 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 A0A1W2PR48 441 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 A0A1W2PRB8 838 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 AGRPO00253 132 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 PRKRAO75569 313 aaKnown RBP16.49■□□□□ 0.23
SRSF1-201ENST00000258962 ABCB1P08183 1280 aaPredicted RBP16.49■□□□□ 0.23
SRSF1-201ENST00000258962 IGF2RP11717 2491 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 DRD2P14416 443 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 GPX2P18283 190 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 FRKP42685 505 aaPredicted RBP16.49■□□□□ 0.23
SRSF1-201ENST00000258962 BTN3A2P78410 334 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 TGM3Q08188 693 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 ABHD18Q0P651 414 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 MAP7Q14244 749 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 ST3GAL2Q16842 350 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 NDUFAF5Q5TEU4 345 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 GLYATQ6IB77 296 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 IRGCQ6NXR0 463 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 PROSER1Q86XN7 944 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 TMEM126BQ8IUX1 230 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 MICU2Q8IYU8 434 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 GOLM1Q8NBJ4 401 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 CAMKVQ8NCB2 501 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 ZCCHC10Q8TBK6 192 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 FAM110BQ8TC76 370 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 ZFP90Q8TF47 636 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 RERGQ96A58 199 aaPredicted RBP16.49■□□□□ 0.23
SRSF1-201ENST00000258962 MAP3K3Q99759 626 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 EFHD1Q9BUP0 239 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 TPT1P8Q9HAU6 139 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 ZNF282Q9UDV7 671 aaPredicted RBP16.49■□□□□ 0.23
SRSF1-201ENST00000258962 MRPS2Q9Y399 296 aaKnown RBP16.49■□□□□ 0.23
SRSF1-201ENST00000258962 LOXL2Q9Y4K0 774 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 ATG4BQ9Y4P1 393 aa16.49■□□□□ 0.23
SRSF1-201ENST00000258962 ACACAQ13085 2346 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 ELOVL7A1L3X0 281 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 SLC9B1P1A6NJY1 282 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 A8MU76 341 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 EVPLLA8MZ36 301 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 TNFSF15O95150 251 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 CAPNS1P04632 268 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 SLC7A1P30825 629 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 CSTF2P33240 577 aaKnown RBP eCLIP16.48■□□□□ 0.23
SRSF1-201ENST00000258962 PCBP4P57723 403 aaKnown RBP16.48■□□□□ 0.23
SRSF1-201ENST00000258962 KIF26BQ2KJY2 2108 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 ADGRG5Q8IZF4 528 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 LILRA2Q8N149 483 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 PQLC1Q8N2U9 271 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 AGBL5Q8NDL9 886 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 RCBTB1Q8NDN9 531 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 PNPT1Q8TCS8 783 aaKnown RBP16.48■□□□□ 0.23
SRSF1-201ENST00000258962 CANT1Q8WVQ1 401 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 EXOSC8Q96B26 276 aaKnown RBP16.48■□□□□ 0.23
SRSF1-201ENST00000258962 ZDHHC12Q96GR4 267 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 SLC46A1Q96NT5 459 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 TACO1Q9BSH4 297 aaKnown RBP16.48■□□□□ 0.23
SRSF1-201ENST00000258962 COPS7BQ9H9Q2 264 aaPredicted RBP16.48■□□□□ 0.23
SRSF1-201ENST00000258962 THSD1Q9NS62 852 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 TAS2R9Q9NYW1 312 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 TAS2R7Q9NYW3 318 aa16.48■□□□□ 0.23
SRSF1-201ENST00000258962 EHD3Q9NZN3 535 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms