RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 WASHC1A8K0Z3 465 aa17.61■□□□□ 0.41
TM6SF1-201ENST00000258909 SIX3O95343 332 aaPredicted RBP17.61■□□□□ 0.41
TM6SF1-201ENST00000258909 SERPINB1P30740 379 aa17.61■□□□□ 0.41
TM6SF1-201ENST00000258909 PTGER4P35408 488 aa17.61■□□□□ 0.41
TM6SF1-201ENST00000258909 HNRNPH2P55795 449 aaKnown RBP17.61■□□□□ 0.41
TM6SF1-201ENST00000258909 CEP128Q6ZU80 1094 aa17.61■□□□□ 0.41
TM6SF1-201ENST00000258909 GPR180Q86V85 440 aa17.61■□□□□ 0.41
TM6SF1-201ENST00000258909 MARVELD2Q8N4S9 558 aa17.61■□□□□ 0.41
TM6SF1-201ENST00000258909 SENP5Q96HI0 755 aaPredicted RBP17.61■□□□□ 0.41
TM6SF1-201ENST00000258909 DGAT2Q96PD7 388 aa17.61■□□□□ 0.41
TM6SF1-201ENST00000258909 TRIM8Q9BZR9 551 aa17.61■□□□□ 0.41
TM6SF1-201ENST00000258909 CPSF2Q9P2I0 782 aaKnown RBP17.61■□□□□ 0.41
TM6SF1-201ENST00000258909 COPS7AQ9UBW8 275 aa17.61■□□□□ 0.41
TM6SF1-201ENST00000258909 ATG4BQ9Y4P1 393 aa17.61■□□□□ 0.41
TM6SF1-201ENST00000258909 KLHL2O95198 593 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 ALDOAP04075 364 aaKnown RBP17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 TYK2P29597 1187 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 PIK3CBP42338 1070 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 STT3AP46977 705 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 PIK3CGP48736 1102 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 NEK2P51955 445 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 ALDH18A1P54886 795 aaKnown RBP17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 FOLH1Q04609 750 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 ASPHQ12797 758 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 GTF2H2Q13888 395 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 ACAP2Q15057 778 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 CPSF6Q16630 551 aaKnown RBP eCLIP17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 GTF2H2CQ6P1K8 395 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 RTL4Q6ZR62 310 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 ZNF295-AS1Q8N0V1 137 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 PLD6Q8N2A8 252 aaKnown RBP17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 RPRMLQ8N4K4 120 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 OR5L2Q8NGL0 311 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 CA5BP1Q8WTZ4 195 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 GPR78Q96P69 363 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 TTTY12Q9BZ98 90 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 VPS11Q9H270 941 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 IPPKQ9H8X2 491 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 PLSCR2Q9NRY7 297 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 ZNF358Q9NW07 568 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 NINJ2Q9NZG7 142 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 RNF11Q9Y3C5 154 aa17.6■□□□□ 0.41
TM6SF1-201ENST00000258909 GLOD5A6NK44 160 aa17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 EEDO75530 441 aaKnown RBP17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 COX7A2P14406 83 aa17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 DNASE1L1P49184 302 aa17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 IGLV3-21P80748 117 aaPredicted RBP17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 TNFRSF17Q02223 184 aa17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 EMC4Q5J8M3 183 aa17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 LIPJQ5W064 366 aa17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 ARHGAP11AQ6P4F7 1023 aa17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 GOLGA7Q7Z5G4 137 aa17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 C9orf40Q8IXQ3 194 aa17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 EID3Q8N140 333 aa17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 OR8K3Q8NH51 312 aa17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 UCN3Q969E3 161 aa17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 RBM18Q96H35 190 aaKnown RBP17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 CENPKQ9BS16 269 aa17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 ZNF717Q9BY31 904 aaPredicted RBP17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 ADGRE2Q9UHX3 823 aa17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 PCDHGA11Q9Y5H2 935 aa17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 LIPGQ9Y5X9 500 aa17.59■□□□□ 0.41
TM6SF1-201ENST00000258909 NPIPA2E9PIF3 369 aa17.58■□□□□ 0.41
TM6SF1-201ENST00000258909 NPIPA3F8WFD2 350 aa17.58■□□□□ 0.41
TM6SF1-201ENST00000258909 KLK8O60259 260 aa17.58■□□□□ 0.41
TM6SF1-201ENST00000258909 CCL3P10147 92 aa17.58■□□□□ 0.41
TM6SF1-201ENST00000258909 CNR1P21554 472 aa17.58■□□□□ 0.41
TM6SF1-201ENST00000258909 SERPINB8P50452 374 aa17.58■□□□□ 0.41
TM6SF1-201ENST00000258909 CKAP4Q07065 602 aaKnown RBP17.58■□□□□ 0.41
TM6SF1-201ENST00000258909 PCBP2Q15366 365 aaKnown RBP eCLIP17.58■□□□□ 0.41
TM6SF1-201ENST00000258909 FAM47EQ6ZV65 393 aa17.58■□□□□ 0.41
TM6SF1-201ENST00000258909 CDK15Q96Q40 435 aa17.58■□□□□ 0.41
TM6SF1-201ENST00000258909 FAM173AQ9BQD7 235 aa17.58■□□□□ 0.41
TM6SF1-201ENST00000258909 MS4A12Q9NXJ0 267 aa17.58■□□□□ 0.41
TM6SF1-201ENST00000258909 COQ3Q9NZJ6 369 aa17.58■□□□□ 0.41
TM6SF1-201ENST00000258909 TNFRSF10DQ9UBN6 386 aa17.58■□□□□ 0.41
TM6SF1-201ENST00000258909 PHF11Q9UIL8 331 aa17.58■□□□□ 0.41
TM6SF1-201ENST00000258909 CCDC168Q8NDH2 2452 aa17.58■□□□□ 0.4
TM6SF1-201ENST00000258909 H0YIV9 168 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 ACOT7O00154 380 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 PROM1O43490 865 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 TMPRSS11DO60235 418 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 GLSO94925 669 aaPredicted RBP17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 GBAP04062 536 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 IGKV3-11P04433 115 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 PTX3P26022 381 aaPredicted RBP17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 PHBP35232 272 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 BSGP35613 385 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 ARL1P40616 181 aaPredicted RBP17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 MAGEA5P43359 124 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 KLC3Q6P597 504 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 OPN5Q6U736 354 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 GK5Q6ZS86 529 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 CCDC91Q7Z6B0 441 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 SLC22A16Q86VW1 577 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 ZCCHC7Q8N3Z6 543 aaKnown RBP17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 TMEM251Q8N6I4 163 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 OR5M9Q8NGP3 310 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 TANKQ92844 425 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 LURAP1Q96LR2 239 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms