RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 REEP3Q6NUK4 255 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 IQCHQ86VS3 1027 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 GALNT13Q8IUC8 556 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 TRAM1L1Q8N609 369 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 SYT14Q8NB59 555 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 OR9A1PQ8NGU1 263 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 GANCQ8TET4 914 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 FBLIM1Q8WUP2 373 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 TP53INP1Q96A56 240 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 PITX2Q99697 317 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 UCK2Q9BZX2 261 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 TBC1D17Q9HA65 648 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 C1GALT1Q9NS00 363 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 ZCCHC3Q9NUD5 404 aaKnown RBP12.86□□□□□ -0.35
VHL-201ENST00000256474 IMP3Q9NV31 184 aaKnown RBP12.86□□□□□ -0.35
VHL-201ENST00000256474 MUTYHQ9UIF7 546 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 IGLV3-16A0A075B6K0 115 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 TMEM229AB2RXF0 380 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 IL1RNP18510 177 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 DGKGP49619 791 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 SLC16A1P53985 500 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 HNRNPA0Q13151 305 aaKnown RBP12.85□□□□□ -0.35
VHL-201ENST00000256474 SPHARQ15513 63 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 PDZK1Q5T2W1 519 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 C6orf120Q7Z4R8 191 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 LHFPL3Q86UP9 236 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 LACC1Q8IV20 430 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 GATAD2BQ8WXI9 593 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 SLC9A6Q92581 669 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 TM9SF2Q99805 663 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 FNDC11Q9BVV2 318 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 PLXNA3P51805 1871 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 GSAPA4D1B5 854 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 PLD2O14939 933 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 SLC16A5O15375 505 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 TNFRSF21O75509 655 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 UGT2B17O75795 530 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 CASP3P42574 277 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 RACK1P63244 317 aaKnown RBP12.85□□□□□ -0.35
VHL-201ENST00000256474 OLR1P78380 273 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 PUM1Q14671 1186 aaKnown RBP eCLIP12.85□□□□□ -0.35
VHL-201ENST00000256474 LASP1Q14847 261 aaKnown RBP12.85□□□□□ -0.35
VHL-201ENST00000256474 LRIT3Q3SXY7 679 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 HENMT1Q5T8I9 393 aaKnown RBP12.85□□□□□ -0.35
VHL-201ENST00000256474 METTL3Q86U44 580 aaKnown RBP12.85□□□□□ -0.35
VHL-201ENST00000256474 C17orf64Q86WR6 236 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 MVB12BQ9H7P6 319 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 SLAMF7Q9NQ25 335 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 TAAR2Q9P1P5 351 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 SLC13A4Q9UKG4 626 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 FBXW2Q9UKT8 454 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 SCN5AQ14524 2016 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 SAGE2PA6NJ88 616 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 SSR2P43308 183 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 MVDP53602 400 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 NXPE4Q6UWF7 544 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 NANOGNBQ7Z5D8 188 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 AMER3Q8N944 861 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 FAM46DQ8NEK8 389 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.85□□□□□ -0.356e-7■■□□□ 13.1
VHL-201ENST00000256474 BBS4Q96RK4 519 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 GFM1Q96RP9 751 aaKnown RBP12.85□□□□□ -0.35
VHL-201ENST00000256474 TBX5Q99593 518 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 GABARAPL3Q9BY60 117 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 SMURF1Q9HCE7 757 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 TEX10Q9NXF1 929 aaPredicted RBP12.85□□□□□ -0.35
VHL-201ENST00000256474 ZNF221Q9UK13 617 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 CLEC4AQ9UMR7 237 aa12.85□□□□□ -0.35
VHL-201ENST00000256474 F5P12259 2224 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 A0A1B0GVC2 190 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 A6NIN4 97 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 PDPK1O15530 556 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 H1F0P07305 194 aaKnown RBP12.84□□□□□ -0.35
VHL-201ENST00000256474 SDHBP21912 280 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 PNLIPRP1P54315 467 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 C1DQ13901 141 aaKnown RBP12.84□□□□□ -0.35
VHL-201ENST00000256474 CRTC2Q53ET0 693 aaPredicted RBP12.84□□□□□ -0.35
VHL-201ENST00000256474 ZNF805Q5CZA5 627 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 PLAG1Q6DJT9 500 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 METTL2BQ6P1Q9 378 aaKnown RBP12.84□□□□□ -0.35
VHL-201ENST00000256474 FAM83HQ6ZRV2 1179 aaPredicted RBP12.84□□□□□ -0.35
VHL-201ENST00000256474 TFGQ92734 400 aaPredicted RBP12.84□□□□□ -0.35
VHL-201ENST00000256474 TRMT61AQ96FX7 289 aaKnown RBP12.84□□□□□ -0.35
VHL-201ENST00000256474 BHLHE41Q9C0J9 482 aaPredicted RBP12.84□□□□□ -0.35
VHL-201ENST00000256474 PCYT1BQ9Y5K3 369 aaPredicted RBP12.84□□□□□ -0.35
VHL-201ENST00000256474 GBF1Q92538 1859 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 PLXNA4Q9HCM2 1894 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 ARID1BQ8NFD5 2236 aaPredicted RBP12.84□□□□□ -0.35
VHL-201ENST00000256474 HAT1O14929 419 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 ARHGEF15O94989 841 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 ZNF30P17039 623 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 INPP1P49441 399 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 FADDQ13158 208 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 SSX1Q16384 188 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 LRRC26Q2I0M4 334 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 RNASE12Q5GAN4 147 aaKnown RBP12.84□□□□□ -0.35
VHL-201ENST00000256474 CRB2Q5IJ48 1285 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 ZDHHC20Q5W0Z9 365 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 PNCKQ6P2M8 343 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 C12orf76Q8N812 135 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms