RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 IFNA21P01568 189 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 CD8BP10966 210 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 OR4D2P58180 307 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 SHC2P98077 582 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 RUNX3Q13761 415 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 LRFN4Q6PJG9 635 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 C1orf21Q9H246 121 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 PDE7BQ9NP56 450 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 COL14A1Q05707 1796 aaKnown RBP17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 KCNC3Q14003 757 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 SHFQ7M4L6 423 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 IL23AQ9NPF7 189 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 ABCC6O95255 1503 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 H3BQ06 376 aaPredicted RBP17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 SLC33A1O00400 549 aaPredicted RBP17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 PHC1P78364 1004 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 SHQ1Q6PI26 577 aaKnown RBP17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 PACRGLQ8N7B6 248 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 KIAA1143Q96AT1 154 aaPredicted RBP17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 ZNF226Q9NYT6 803 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 MRPL15Q9P015 296 aaKnown RBP17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 PIAS3Q9Y6X2 628 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 BPNT1O95861 308 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 CA3P07451 260 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 TFPTP0C1Z6 253 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 ETFAP13804 333 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 EPCAMP16422 314 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 FAM214AQ32MH5 1076 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 NCEH1Q6PIU2 408 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 ENPP6Q6UWR7 440 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 ZNF517Q6ZMY9 492 aaPredicted RBP17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 PPP4R1LQ9P1A2 415 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 ATF6P18850 670 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 AK4P27144 223 aaPredicted RBP17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 FCRLBQ6BAA4 426 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 C6orf120Q7Z4R8 191 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 FAM86B1Q8N7N1 296 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 SAMD12Q8N8I0 201 aa17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 ZNF701Q9NV72 531 aaPredicted RBP17.9■□□□□ 0.46
SMARCC1-201ENST00000254480 ELAVL3Q14576 367 aaKnown RBP17.89■□□□□ 0.46
SMARCC1-201ENST00000254480 CCDC80Q76M96 950 aa17.89■□□□□ 0.46
SMARCC1-201ENST00000254480 OR52P1PQ8NH57 321 aa17.89■□□□□ 0.46
SMARCC1-201ENST00000254480 ZNF675Q8TD23 568 aa17.89■□□□□ 0.46
SMARCC1-201ENST00000254480 OR5P2Q8WZ92 322 aa17.89■□□□□ 0.46
SMARCC1-201ENST00000254480 MACROD1Q9BQ69 325 aa17.89■□□□□ 0.46
SMARCC1-201ENST00000254480 URB1O60287 2271 aaKnown RBP17.89■□□□□ 0.46
SMARCC1-201ENST00000254480 GSRP00390 522 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 OTX2P32243 289 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 ZC3H14Q6PJT7 736 aaKnown RBP17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 RNF111Q6ZNA4 994 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 UBE2Q1Q7Z7E8 422 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 IGFN1Q86VF2 1251 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 SLC5A7Q9GZV3 580 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 ZNF350Q9GZX5 532 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 TREM1Q9NP99 234 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 STARD5Q9NSY2 213 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 MGAT4BQ9UQ53 548 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 RGPD8O14715 1765 aaPredicted RBP17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 CITO14578 2027 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 S100A16Q96FQ6 103 aaKnown RBP17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 NUDT15Q9NV35 164 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 C14orf166Q9Y224 244 aaKnown RBP17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 LRRC42Q9Y546 428 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 CD72P21854 359 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 ALG10Q5BKT4 473 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 MYLIPQ8WY64 445 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 C14orf119Q9NWQ9 140 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 TAS2R10Q9NYW0 307 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 NUP50Q9UKX7 468 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 A6NCN8 305 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 RING1Q06587 406 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 CLLU1OSQ5K130 101 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 VTCN1Q7Z7D3 282 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 LRRC20Q8TCA0 184 aa17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 YARS2Q9Y2Z4 477 aaKnown RBP17.89■□□□□ 0.45
SMARCC1-201ENST00000254480 ANHXE9PGG2 379 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 SYNGR4O95473 234 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 H2BFMP0C1H6 154 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 GRIA2P42262 883 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 GRK1Q15835 563 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 ZNF789Q5FWF6 425 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 RPS26P11Q5JNZ5 115 aaPredicted RBP17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 ZFAND4Q86XD8 727 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 POPDC3Q9HBV1 291 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 KCMF1Q9P0J7 381 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 CYP17A1P05093 508 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 LRRC25Q8N386 305 aaPredicted RBP17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 SECISBP2Q96T21 854 aaKnown RBP17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 ZNF717Q9BY31 904 aaPredicted RBP17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 NXPE4Q6UWF7 544 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 SHISA6Q6ZSJ9 500 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 ZNF551Q7Z340 670 aaPredicted RBP17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 AVL9Q8NBF6 648 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 UHRF1Q96T88 793 aaPredicted RBP17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 SLC30A2Q9BRI3 323 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 FAM217AQ8IXS0 508 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 TMEM151AQ8N4L1 468 aa17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 ZSCAN4Q8NAM6 433 aaPredicted RBP17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 LSM14AQ8ND56 463 aaKnown RBP17.88■□□□□ 0.45
SMARCC1-201ENST00000254480 DENND6BQ8NEG7 585 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms