RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 CRCPO75575 148 aa22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 GPR75O95800 540 aa22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 GBAP04062 536 aa22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 MAPK12P53778 367 aa22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 TRA2BP62995 288 aaKnown RBP22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 PLIN5Q00G26 463 aa22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 KCNC4Q03721 635 aa22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 FOLH1Q04609 750 aa22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 GALNT1Q10472 559 aaPredicted RBP22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 INAQ16352 499 aa22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 FCRLBQ6BAA4 426 aa22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 OR52E8Q6IFG1 317 aa22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 HORMAD2Q8N7B1 307 aa22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 PTPMT1Q8WUK0 201 aaPredicted RBP22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 NCLNQ969V3 563 aa22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 SNRNP40Q96DI7 357 aaKnown RBP22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 UTP23Q9BRU9 249 aaKnown RBP22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 VPS4AQ9UN37 437 aa22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 TIMM22Q9Y584 194 aa22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 COPG1Q9Y678 874 aaKnown RBP22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 SETXQ7Z333 2677 aaKnown RBP22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 TRBV11-1A0A0K0K1C0 115 aa22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 C17orf105B2RV13 164 aa22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 FCHO1O14526 889 aa22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 ZFAND5O76080 213 aa22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 AIFM1O95831 613 aa22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 ALOX15P16050 662 aaPredicted RBP22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 GALNSP34059 522 aa22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 MLF1P58340 268 aa22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 IGFBP7Q16270 282 aa22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 SPIN4Q56A73 249 aa22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 ST13P4Q8IZP2 240 aaPredicted RBP22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 GALNT11Q8NCW6 608 aa22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 CHTF18Q8WVB6 975 aa22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 ART5Q96L15 291 aa22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 HBEGFQ99075 208 aa22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 NPAS2Q99743 824 aa22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 SSU72Q9NP77 194 aaKnown RBP22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 AGPAT4Q9NRZ5 378 aa22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 MAP10Q9P2G4 905 aa22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 MCM8Q9UJA3 840 aa22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 PCDHGB6Q9Y5F9 930 aa22.7■■□□□ 1.22
SDF2L1-201ENST00000248958 ASH1LQ9NR48 2969 aaKnown RBP22.69■■□□□ 1.22
SDF2L1-201ENST00000248958 CNTRLQ7Z7A1 2325 aa22.69■■□□□ 1.22
SDF2L1-201ENST00000248958 C1orf226A1L170 272 aa22.69■■□□□ 1.22
SDF2L1-201ENST00000248958 GABRR3A8MPY1 467 aa22.69■■□□□ 1.22
SDF2L1-201ENST00000248958 UROSP10746 265 aa22.69■■□□□ 1.22
SDF2L1-201ENST00000248958 ALDH3A1P30838 453 aa22.69■■□□□ 1.22
SDF2L1-201ENST00000248958 ID2Q02363 134 aa22.69■■□□□ 1.22
SDF2L1-201ENST00000248958 CEP85LQ5SZL2 805 aa22.69■■□□□ 1.22
SDF2L1-201ENST00000248958 LRIG3Q6UXM1 1119 aa22.69■■□□□ 1.22
SDF2L1-201ENST00000248958 OR4N5Q8IXE1 308 aa22.69■■□□□ 1.22
SDF2L1-201ENST00000248958 CISD2Q8N5K1 135 aaKnown RBP22.69■■□□□ 1.22
SDF2L1-201ENST00000248958 C1orf52Q8N6N3 182 aaKnown RBP22.69■■□□□ 1.22
SDF2L1-201ENST00000248958 ZIM3Q96PE6 472 aa22.69■■□□□ 1.22
SDF2L1-201ENST00000248958 KCNA7Q96RP8 456 aa22.69■■□□□ 1.22
SDF2L1-201ENST00000248958 GATA5Q9BWX5 397 aaPredicted RBP22.69■■□□□ 1.22
SDF2L1-201ENST00000248958 ACPTQ9BZG2 426 aa22.69■■□□□ 1.22
SDF2L1-201ENST00000248958 SLC17A7Q9P2U7 560 aa22.69■■□□□ 1.22
SDF2L1-201ENST00000248958 COPS7AQ9UBW8 275 aa22.69■■□□□ 1.22
SDF2L1-201ENST00000248958 PYCARD-AS1I3L0S3 204 aa22.68■■□□□ 1.22
SDF2L1-201ENST00000248958 CTIFO43310 598 aaKnown RBP22.68■■□□□ 1.22
SDF2L1-201ENST00000248958 TYROBPO43914 113 aa22.68■■□□□ 1.22
SDF2L1-201ENST00000248958 NPHS1O60500 1241 aa22.68■■□□□ 1.22
SDF2L1-201ENST00000248958 PRAMEF2O60811 474 aa22.68■■□□□ 1.22
SDF2L1-201ENST00000248958 PRKRAO75569 313 aaKnown RBP22.68■■□□□ 1.22
SDF2L1-201ENST00000248958 MYZAPP0CAP1 466 aa22.68■■□□□ 1.22
SDF2L1-201ENST00000248958 PIK3R1P27986 724 aa22.68■■□□□ 1.22
SDF2L1-201ENST00000248958 HTR6P50406 440 aa22.68■■□□□ 1.22
SDF2L1-201ENST00000248958 TUBA3CQ13748 450 aa22.68■■□□□ 1.22
SDF2L1-201ENST00000248958 NDUFAF5Q5TEU4 345 aa22.68■■□□□ 1.22
SDF2L1-201ENST00000248958 TUBA3EQ6PEY2 450 aa22.68■■□□□ 1.22
SDF2L1-201ENST00000248958 HSDL2Q6YN16 418 aa22.68■■□□□ 1.22
SDF2L1-201ENST00000248958 OR8K3Q8NH51 312 aa22.68■■□□□ 1.22
SDF2L1-201ENST00000248958 FAIM2Q9BWQ8 316 aa22.68■■□□□ 1.22
SDF2L1-201ENST00000248958 SIRT5Q9NXA8 310 aa22.68■■□□□ 1.22
SDF2L1-201ENST00000248958 TEX10Q9NXF1 929 aaPredicted RBP22.68■■□□□ 1.22
SDF2L1-201ENST00000248958 ZNF223Q9UK11 482 aaPredicted RBP22.68■■□□□ 1.22
SDF2L1-201ENST00000248958 PCDHA9Q9Y5H5 950 aa22.68■■□□□ 1.22
SDF2L1-201ENST00000248958 MYOCOSA0A1B0GUC4 107 aa22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 F10P00742 488 aa22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 SLC35E2P0CK97 266 aa22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 TRHRP34981 398 aaPredicted RBP22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 CD96P40200 585 aa22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 GSTM5P46439 218 aa22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 FOXA1P55317 472 aa22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 ACSM2AQ08AH3 577 aa22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 SPRED3Q2MJR0 410 aa22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 PRR30Q53SZ7 412 aaPredicted RBP22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 ACSM2BQ68CK6 577 aa22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 OR4K14Q8NGD5 310 aa22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 SLC2A12Q8TD20 617 aa22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 BARD1Q99728 777 aaKnown RBP22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 OR8D2Q9GZM6 311 aa22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 CLMPQ9H6B4 373 aa22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 EML4Q9HC35 981 aaKnown RBP22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 RRAGDQ9NQL2 400 aaPredicted RBP22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 ASF1BQ9NVP2 202 aa22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 PSME2Q9UL46 239 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms