RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 SPEGQ15772 3267 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 CAPN5O15484 640 aaPredicted RBP14.98□□□□□ -0.01
LRFN1-201ENST00000248668 KRT75O95678 551 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 C8orf89P0DMQ9 161 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 C21orf33P30042 268 aaPredicted RBP14.98□□□□□ -0.01
LRFN1-201ENST00000248668 RPL3P39023 403 aaKnown RBP14.98□□□□□ -0.01
LRFN1-201ENST00000248668 TMBIM6P55061 237 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 CSNK1G2P78368 415 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 SLC35A2P78381 396 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 GRSF1Q12849 480 aaKnown RBP eCLIP14.98□□□□□ -0.01
LRFN1-201ENST00000248668 SLC16A12Q6ZSM3 486 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 CAMK1GQ96NX5 476 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 TEFMQ96QE5 360 aaKnown RBP14.98□□□□□ -0.01
LRFN1-201ENST00000248668 EPYCQ99645 322 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 SPATA9Q9BWV2 254 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 KLHL25Q9H0H3 589 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 RNF6Q9Y252 685 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 ADAMDEC1O15204 470 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 TCEA1P23193 301 aaKnown RBP14.98□□□□□ -0.01
LRFN1-201ENST00000248668 FADDQ13158 208 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 ZNF829Q3KNS6 432 aaPredicted RBP14.98□□□□□ -0.01
LRFN1-201ENST00000248668 UBE3DQ7Z6J8 389 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 RBM45Q8IUH3 476 aaKnown RBP14.98□□□□□ -0.01
LRFN1-201ENST00000248668 SLC38A5Q8WUX1 472 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 APH1BQ8WW43 257 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 HPS1Q92902 700 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 POP5Q969H6 163 aaKnown RBP14.98□□□□□ -0.01
LRFN1-201ENST00000248668 FKBP10Q96AY3 582 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 TMEM19Q96HH6 336 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 TEX101Q9BY14 249 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 PALMDQ9NP74 551 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 TRPC4Q9UBN4 977 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 ANGPT4Q9Y264 503 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 A0A1W2PS29 197 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 H0Y8X5 98 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 ARAFP10398 606 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 HOXB6P17509 224 aaKnown RBP14.97□□□□□ -0.01
LRFN1-201ENST00000248668 GPC1P35052 558 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 VBP1P61758 197 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 EEF1A2Q05639 463 aaKnown RBP14.97□□□□□ -0.01
LRFN1-201ENST00000248668 INAQ16352 499 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 BCL2A1Q16548 175 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 ITPRIPL2Q3MIP1 535 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 PERM1Q5SV97 790 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 OR8K5Q8NH50 307 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 TBC1D20Q96BZ9 403 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 FCRL4Q96PJ5 515 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 WFDC6Q9BQY6 131 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 SPHK1Q9NYA1 384 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 RGS10O43665 173 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 TPST2O60704 377 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 POU2F2P09086 479 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 UQCRC2P22695 453 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 HEPACAMQ14CZ8 416 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 SYT16Q17RD7 645 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 C6orf120Q7Z4R8 191 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 TSPYL5Q86VY4 417 aaPredicted RBP14.97□□□□□ -0.01
LRFN1-201ENST00000248668 NUDT13Q86X67 352 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 TAGAPQ8N103 731 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 SLC15A4Q8N697 577 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 TP53I13Q8NBR0 393 aaPredicted RBP14.97□□□□□ -0.01
LRFN1-201ENST00000248668 XAGE5Q8WWM1 108 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 RPL3LQ92901 407 aaKnown RBP14.97□□□□□ -0.01
LRFN1-201ENST00000248668 DPH7Q9BTV6 452 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 RSPO3Q9BXY4 272 aaPredicted RBP14.97□□□□□ -0.01
LRFN1-201ENST00000248668 AICDAQ9GZX7 198 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 ANKRA2Q9H9E1 313 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 CTPS2Q9NRF8 586 aa14.97□□□□□ -0.01
LRFN1-201ENST00000248668 SCHIP1Q9P0W5 487 aaPredicted RBP14.97□□□□□ -0.01
LRFN1-201ENST00000248668 C4orf51C9J302 202 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 NARSO43776 548 aaKnown RBP14.96□□□□□ -0.01
LRFN1-201ENST00000248668 CEACAM5P06731 702 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 C5AR1P21730 350 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 CXCR2P25025 360 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 RAB8AP61006 207 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 REEP5Q00765 189 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 ZNF630Q2M218 657 aaPredicted RBP14.96□□□□□ -0.01
LRFN1-201ENST00000248668 LEXMQ3ZCV2 418 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 C10orf62Q5T681 223 aaPredicted RBP14.96□□□□□ -0.01
LRFN1-201ENST00000248668 ZNF793Q6ZN11 406 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 DEF8Q6ZN54 512 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 PAGE2Q7Z2X7 111 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 FBXL6Q8N531 539 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 OR52E1Q8NGJ3 308 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 OR2A1Q8NGT9 310 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 NDNFQ8TB73 568 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 PHF10Q8WUB8 498 aaKnown RBP14.96□□□□□ -0.01
LRFN1-201ENST00000248668 FBLIM1Q8WUP2 373 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 TRMT61BQ9BVS5 477 aaKnown RBP14.96□□□□□ -0.01
LRFN1-201ENST00000248668 SLC17A9Q9BYT1 436 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 KCNK12Q9HB15 430 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 TMEM9Q9P0T7 183 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 FBXW2Q9UKT8 454 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 ERI3O43414 337 aaKnown RBP14.96□□□□□ -0.01
LRFN1-201ENST00000248668 CNOT3O75175 753 aaKnown RBP14.96□□□□□ -0.01
LRFN1-201ENST00000248668 ITIH1P19827 911 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 AK4P27144 223 aaPredicted RBP14.96□□□□□ -0.01
LRFN1-201ENST00000248668 IGFALSP35858 605 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 PPP2CBP62714 309 aa14.96□□□□□ -0.01
LRFN1-201ENST00000248668 PPP2CAP67775 309 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms