RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ATG2BQ96BY7 2078 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 RFXAPO00287 272 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 WWP2O00308 870 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 CTDSP2O14595 271 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 SRPRAP08240 638 aaKnown RBP24.28■■□□□ 1.48
RAB40C-201ENST00000248139 MAPK9P45984 424 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 IRF3Q14653 427 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 SYPL1Q16563 259 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 KHDRBS2Q5VWX1 349 aaKnown RBP24.28■■□□□ 1.48
RAB40C-201ENST00000248139 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.28■■□□□ 1.48
RAB40C-201ENST00000248139 GPR65Q8IYL9 337 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 AMER2Q8N7J2 671 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 RAD51AP1Q96B01 352 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 PDXPQ96GD0 296 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 EXOSC4Q9NPD3 245 aaKnown RBP24.28■■□□□ 1.48
RAB40C-201ENST00000248139 ANHXE9PGG2 379 aa24.27■■□□□ 1.48
RAB40C-201ENST00000248139 ARHGAP33O14559 1287 aa24.27■■□□□ 1.48
RAB40C-201ENST00000248139 SCAMP1O15126 338 aa24.27■■□□□ 1.48
RAB40C-201ENST00000248139 CHRM5P08912 532 aaPredicted RBP24.27■■□□□ 1.48
RAB40C-201ENST00000248139 DDCP20711 480 aa24.27■■□□□ 1.48
RAB40C-201ENST00000248139 BSGP35613 385 aa24.27■■□□□ 1.48
RAB40C-201ENST00000248139 RPL3P39023 403 aaKnown RBP24.27■■□□□ 1.48
RAB40C-201ENST00000248139 PIN1Q13526 163 aaPredicted RBP24.27■■□□□ 1.48
RAB40C-201ENST00000248139 SSX1Q16384 188 aa24.27■■□□□ 1.48
RAB40C-201ENST00000248139 PAQR6Q6TCH4 344 aa24.27■■□□□ 1.48
RAB40C-201ENST00000248139 C17orf64Q86WR6 236 aa24.27■■□□□ 1.48
RAB40C-201ENST00000248139 RAD9AQ99638 391 aa24.27■■□□□ 1.48
RAB40C-201ENST00000248139 YIPF4Q9BSR8 244 aa24.27■■□□□ 1.48
RAB40C-201ENST00000248139 SERHL2Q9H4I8 314 aa24.27■■□□□ 1.48
RAB40C-201ENST00000248139 KCNK12Q9HB15 430 aa24.27■■□□□ 1.48
RAB40C-201ENST00000248139 LHX9Q9NQ69 397 aa24.27■■□□□ 1.48
RAB40C-201ENST00000248139 RBMX2Q9Y388 322 aaKnown RBP24.27■■□□□ 1.48
RAB40C-201ENST00000248139 HEATR5BQ9P2D3 2071 aa24.27■■□□□ 1.48
RAB40C-201ENST00000248139 PRAMEF27A3QJZ7 478 aa24.27■■□□□ 1.48
RAB40C-201ENST00000248139 PSMD11O00231 422 aa24.27■■□□□ 1.48
RAB40C-201ENST00000248139 AGRPO00253 132 aa24.27■■□□□ 1.48
RAB40C-201ENST00000248139 ADCK2Q7Z695 626 aa24.27■■□□□ 1.48
RAB40C-201ENST00000248139 MVB12BQ9H7P6 319 aa24.27■■□□□ 1.48
RAB40C-201ENST00000248139 MYO10Q9HD67 2058 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 TMEM221A6NGB7 291 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 NME6O75414 186 aaPredicted RBP24.26■■□□□ 1.47
RAB40C-201ENST00000248139 MFN2O95140 757 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 ITGB7P26010 798 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 TGM4P49221 684 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 TPTEP56180 551 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 KRT78Q8N1N4 520 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 APOBEC4Q8WW27 367 aaKnown RBP24.26■■□□□ 1.47
RAB40C-201ENST00000248139 HEPACAM2A8MVW5 462 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 HMGN4O00479 90 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 SSX4O60224 188 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 LCMT2O60294 686 aaKnown RBP24.26■■□□□ 1.47
RAB40C-201ENST00000248139 KCNK2O95069 426 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 OR12D1P0DN82 309 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 CD72P21854 359 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 TMED10P49755 219 aaKnown RBP24.26■■□□□ 1.47
RAB40C-201ENST00000248139 AMZ2Q86W34 360 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 XAGE5Q8WWM1 108 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 RERGLQ9H628 205 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 XKR8Q9H6D3 395 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 SIRT3Q9NTG7 399 aaPredicted RBP24.26■■□□□ 1.47
RAB40C-201ENST00000248139 CLN6Q9NWW5 311 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 SPATA7Q9P0W8 599 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 REV1Q9UBZ9 1251 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 AP1M2Q9Y6Q5 423 aa24.26■■□□□ 1.47
RAB40C-201ENST00000248139 M0R3H8 397 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 PDPK1O15530 556 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 GPX5O75715 221 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 ALOX5P09917 674 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 TNNI3P19429 210 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 GJA8P48165 433 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 PRKAG1P54619 331 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 SPATC1Q76KD6 591 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 C11orf74Q86VG3 221 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 OR8D1Q8WZ84 308 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 PSD2Q9BQI7 771 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 CNPPD1Q9BV87 410 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 C14orf119Q9NWQ9 140 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 OR1F1O43749 312 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 SERPINB1P30740 379 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 S100A5P33763 92 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 ZNF234Q14588 700 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 HNRNPA1L2Q32P51 320 aaKnown RBP24.25■■□□□ 1.47
RAB40C-201ENST00000248139 SAXO2Q658L1 398 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 ATCAYQ86WG3 371 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 MTERF3Q96E29 417 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 NEURL3Q96EH8 262 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 PRR14Q9BWN1 585 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 DPEP2Q9H4A9 486 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 TRPM6Q9BX84 2022 aa24.25■■□□□ 1.47
RAB40C-201ENST00000248139 TLR4O00206 839 aa24.24■■□□□ 1.47
RAB40C-201ENST00000248139 ELAVL4P26378 380 aaKnown RBP24.24■■□□□ 1.47
RAB40C-201ENST00000248139 WASP42768 502 aa24.24■■□□□ 1.47
RAB40C-201ENST00000248139 UGT2B15P54855 530 aa24.24■■□□□ 1.47
RAB40C-201ENST00000248139 LCTLQ6UWM7 567 aa24.24■■□□□ 1.47
RAB40C-201ENST00000248139 SLC34A3Q8N130 599 aa24.24■■□□□ 1.47
RAB40C-201ENST00000248139 MAPKAP1Q9BPZ7 522 aa24.24■■□□□ 1.47
RAB40C-201ENST00000248139 MS4A8Q9BY19 250 aa24.24■■□□□ 1.47
RAB40C-201ENST00000248139 SLC28A2O43868 658 aa24.24■■□□□ 1.47
RAB40C-201ENST00000248139 APOL3O95236 402 aa24.24■■□□□ 1.47
RAB40C-201ENST00000248139 SFSWAPQ12872 951 aaKnown RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms