RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 FBXO30Q8TB52 745 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 MAL2Q969L2 176 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 PPWD1Q96BP3 646 aaKnown RBP14.36□□□□□ -0.11
HDHD3-201ENST00000238379 CSF3RQ99062 836 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 DUSP23Q9BVJ7 150 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 CHID1Q9BWS9 393 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 UGT2B28Q9BY64 529 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 SEMA6AQ9H2E6 1030 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 VCX3BQ9H321 246 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 RAD21L1Q9H4I0 556 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 PRDM9Q9NQV7 894 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 ZSCAN32Q9NX65 697 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 PSME2Q9UL46 239 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 FAF1Q9UNN5 650 aaPredicted RBP14.36□□□□□ -0.11
HDHD3-201ENST00000238379 PLCL2Q9UPR0 1127 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 DUX1O43812 170 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 PRKD3O94806 890 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 ZBTB11O95625 1053 aaPredicted RBP14.36□□□□□ -0.11
HDHD3-201ENST00000238379 SERPINA1P01009 418 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 C8orf89P0DMQ9 161 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 BMP2P12643 396 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 CSNK2A2P19784 350 aaPredicted RBP14.36□□□□□ -0.11
HDHD3-201ENST00000238379 FASP25445 335 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 CD1CP29017 333 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 KDELR2P33947 212 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 PCGF2P35227 344 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 FEN1P39748 380 aaKnown RBP14.36□□□□□ -0.11
HDHD3-201ENST00000238379 MLLT3P42568 568 aaPredicted RBP14.36□□□□□ -0.11
HDHD3-201ENST00000238379 CCT3P49368 545 aaKnown RBP14.36□□□□□ -0.11
HDHD3-201ENST00000238379 GRAMD1BQ3KR37 738 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 ZNF528Q3MIS6 628 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 AMZ1Q400G9 498 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 CCDC116Q8IYX3 515 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 CARFQ8N187 725 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 Q8N9G6 341 aaPredicted RBP14.36□□□□□ -0.11
HDHD3-201ENST00000238379 C11orf65Q8NCR3 313 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 ZFP28Q8NHY6 868 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 RNF145Q96MT1 663 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 ZNF184Q99676 751 aaPredicted RBP14.36□□□□□ -0.11
HDHD3-201ENST00000238379 ASPSCR1Q9BZE9 553 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 TMEM38AQ9H6F2 299 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 GAREM1Q9H706 876 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 PDE7BQ9NP56 450 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 SOHLH2Q9NX45 425 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 KLHL3Q9UH77 587 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 ENTPD4Q9Y227 616 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 A0A0C4DFX4 3053 aa14.35□□□□□ -0.11
HDHD3-201ENST00000238379 PATE3B3GLJ2 98 aa14.35□□□□□ -0.11
HDHD3-201ENST00000238379 SP9P0CG40 484 aa14.35□□□□□ -0.11
HDHD3-201ENST00000238379 RAP2AP10114 183 aa14.35□□□□□ -0.11
HDHD3-201ENST00000238379 FCGR1AP12314 374 aa14.35□□□□□ -0.11
HDHD3-201ENST00000238379 CSF2RBP32927 897 aa14.35□□□□□ -0.11
HDHD3-201ENST00000238379 EEF1A2Q05639 463 aaKnown RBP14.35□□□□□ -0.11
HDHD3-201ENST00000238379 RBBP4Q09028 425 aa14.35□□□□□ -0.11
HDHD3-201ENST00000238379 FAM98BQ52LJ0 330 aaKnown RBP14.35□□□□□ -0.11
HDHD3-201ENST00000238379 SFT2D3Q587I9 215 aa14.35□□□□□ -0.11
HDHD3-201ENST00000238379 GCNT6Q5T4J0 391 aa14.35□□□□□ -0.11
HDHD3-201ENST00000238379 USP53Q70EK8 1073 aa14.35□□□□□ -0.11
HDHD3-201ENST00000238379 C6orf120Q7Z4R8 191 aa14.35□□□□□ -0.11
HDHD3-201ENST00000238379 PLXDC1Q8IUK5 500 aa14.35□□□□□ -0.11
HDHD3-201ENST00000238379 SHISA5Q8N114 240 aa14.35□□□□□ -0.11
HDHD3-201ENST00000238379 EID3Q8N140 333 aa14.35□□□□□ -0.11
HDHD3-201ENST00000238379 OR5T3Q8NGG3 340 aa14.35□□□□□ -0.11
HDHD3-201ENST00000238379 CEP76Q8TAP6 659 aa14.35□□□□□ -0.11
HDHD3-201ENST00000238379 POP5Q969H6 163 aaKnown RBP14.35□□□□□ -0.11
HDHD3-201ENST00000238379 NPLQ9BXD5 320 aaPredicted RBP14.35□□□□□ -0.11
HDHD3-201ENST00000238379 SEMA5BQ9P283 1151 aa14.35□□□□□ -0.11
HDHD3-201ENST00000238379 LY6G6EA0A0G2JKS1 128 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 FAM149AA5PLN7 773 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 CYR61O00622 381 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 YKT6O15498 198 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 GCM2O75603 506 aaPredicted RBP14.34□□□□□ -0.11
HDHD3-201ENST00000238379 MED26O95402 600 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 MT-ND1P03886 318 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 ALPPL2P10696 532 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 TLX1P31314 330 aaPredicted RBP14.34□□□□□ -0.11
HDHD3-201ENST00000238379 MPIP34949 423 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 GPC1P35052 558 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 SIM1P81133 766 aaPredicted RBP14.34□□□□□ -0.11
HDHD3-201ENST00000238379 CHRNB3Q05901 458 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 SPIDRQ14159 915 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 TAF11Q15544 211 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 SPDYE7PQ495Y7 208 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 OR52E8Q6IFG1 317 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 SPRED1Q7Z699 444 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 GALNT10Q86SR1 603 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 ANKFN1Q8N957 763 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 CCDC74AQ96AQ1 378 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 PYURFQ96I23 114 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 ANKHQ9HCJ1 492 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 GIMAP4Q9NUV9 329 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 TMEM9Q9P0T7 183 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 DTNAQ9Y4J8 743 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 ZNF780BQ9Y6R6 833 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 U3KQA8 63 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 MN1Q10571 1320 aaPredicted RBP14.34□□□□□ -0.11
HDHD3-201ENST00000238379 SGK494L7N484 410 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 CASC3O15234 703 aaKnown RBP14.34□□□□□ -0.11
HDHD3-201ENST00000238379 SIGLEC6O43699 453 aa14.34□□□□□ -0.11
HDHD3-201ENST00000238379 PNLIPP16233 465 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms