RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 SPTBP11277 2137 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 IGKV3D-11A0A0A0MRZ8 115 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 GNG14A0A1W2PPG7 69 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 TCRBV16S1A1N1A0A5B0 115 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 WDR91A4D1P6 747 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 HMGB1P1B2RPK0 211 aaPredicted RBP10.57□□□□□ -0.72
SF3B6-201ENST00000233468 DPM1O60762 260 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 EEDO75530 441 aaKnown RBP10.57□□□□□ -0.72
SF3B6-201ENST00000233468 DNAJB5O75953 348 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 SEC24DO94855 1032 aaPredicted RBP10.57□□□□□ -0.72
SF3B6-201ENST00000233468 HSPA4LO95757 839 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 IFNA16P05015 189 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 DHRS4L1P0CG22 281 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 MAOAP21397 527 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 BTG2P78543 158 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 PCOLCEQ15113 449 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 CHI3L2Q15782 390 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 BTBD16Q32M84 506 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 CRB2Q5IJ48 1285 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 SH2D4BQ5SQS7 431 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 ATG16L1Q676U5 607 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 HIST2H2BCQ6DN03 193 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 OR52E8Q6IFG1 317 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 MRM1Q6IN84 353 aaKnown RBP10.57□□□□□ -0.72
SF3B6-201ENST00000233468 PAPD4Q6PIY7 484 aaKnown RBP10.57□□□□□ -0.72
SF3B6-201ENST00000233468 ASB18Q6ZVZ8 466 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 C1orf52Q8N6N3 182 aaKnown RBP10.57□□□□□ -0.72
SF3B6-201ENST00000233468 FDCSPQ8NFU4 85 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 RAB3IL1Q8TBN0 382 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 CHTF18Q8WVB6 975 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 TSLPQ969D9 159 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 RBM18Q96H35 190 aaKnown RBP10.57□□□□□ -0.72
SF3B6-201ENST00000233468 THOC3Q96J01 351 aaKnown RBP10.57□□□□□ -0.72
SF3B6-201ENST00000233468 ATP6V1G3Q96LB4 118 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 KCNA7Q96RP8 456 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 SORBS1Q9BX66 1292 aaKnown RBP10.57□□□□□ -0.72
SF3B6-201ENST00000233468 ZNF717Q9BY31 904 aaPredicted RBP10.57□□□□□ -0.72
SF3B6-201ENST00000233468 ALOXE3Q9BYJ1 711 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 SHCBP1LQ9BZQ2 653 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 ILKAPQ9H0C8 392 aaPredicted RBP10.57□□□□□ -0.72
SF3B6-201ENST00000233468 EPS8L2Q9H6S3 715 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 ADAP2Q9NPF8 381 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 ABI3Q9P2A4 366 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 MCM8Q9UJA3 840 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 TP53TG5Q9Y2B4 290 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.57□□□□□ -0.72
SF3B6-201ENST00000233468 TRAF6Q9Y4K3 522 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 ATG4BQ9Y4P1 393 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 ASB4Q9Y574 426 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 CLCA3PQ9Y6N3 262 aa10.57□□□□□ -0.72
SF3B6-201ENST00000233468 SEC16AO15027 2179 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 C1orf226A1L170 272 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 CLEC18AA5D8T8 446 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 SAGE2PA6NJ88 616 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 CDK2AP1O14519 115 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 SNRNP200O75643 2136 aaKnown RBP10.56□□□□□ -0.72
SF3B6-201ENST00000233468 PRR35P0CG20 571 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 DDX5P17844 614 aaKnown RBP10.56□□□□□ -0.72
SF3B6-201ENST00000233468 TNNI3P19429 210 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 FOXA1P55317 472 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 ABCE1P61221 599 aaKnown RBP10.56□□□□□ -0.72
SF3B6-201ENST00000233468 PLIN5Q00G26 463 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 TBL3Q12788 808 aaKnown RBP10.56□□□□□ -0.72
SF3B6-201ENST00000233468 STX3Q13277 289 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 HEPACAMQ14CZ8 416 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 ELAVL1Q15717 326 aaKnown RBP10.56□□□□□ -0.72
SF3B6-201ENST00000233468 TCHHL1Q5QJ38 904 aaPredicted RBP10.56□□□□□ -0.72
SF3B6-201ENST00000233468 KANK2Q63ZY3 851 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 GALNT18Q6P9A2 607 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 CLEC18BQ6UXF7 455 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 ZCCHC23Q6ZST2 131 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 LANCL3Q6ZV70 420 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 DDIASQ8IXT1 998 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 SAMD14Q8IZD0 417 aaPredicted RBP10.56□□□□□ -0.72
SF3B6-201ENST00000233468 TEX19Q8NA77 164 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 CLEC18CQ8NCF0 446 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 OR14A16Q8NHC5 309 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 ART5Q96L15 291 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 IMMP1LQ96LU5 166 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 DGAT2Q96PD7 388 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 LMF1Q96S06 567 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 CSF3RQ99062 836 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 HBEGFQ99075 208 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 SMAD5Q99717 465 aaKnown RBP10.56□□□□□ -0.72
SF3B6-201ENST00000233468 ACPTQ9BZG2 426 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 MLXIPLQ9NP71 852 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 MMP25Q9NPA2 562 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 NECTIN3Q9NQS3 549 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 PNO1Q9NRX1 252 aaKnown RBP10.56□□□□□ -0.72
SF3B6-201ENST00000233468 SIRT5Q9NXA8 310 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 VTI1BQ9UEU0 232 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 ANAPC2Q9UJX6 822 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 TMED5Q9Y3A6 229 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 FIS1Q9Y3D6 152 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 SPTBN1Q01082 2364 aaKnown RBP10.56□□□□□ -0.72
SF3B6-201ENST00000233468 HEATR5BQ9P2D3 2071 aa10.56□□□□□ -0.72
SF3B6-201ENST00000233468 RP1L1Q8IWN7 2480 aaPredicted RBP10.56□□□□□ -0.72
SF3B6-201ENST00000233468 CRYBG3Q68DQ2 2970 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 IGHV3-20A0A0C4DH32 117 aa10.55□□□□□ -0.72
SF3B6-201ENST00000233468 OR2W5A6NFC9 320 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms