RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 CTU1Q7Z7A3 348 aaKnown RBP13.25□□□□□ -0.29
HCFC2-201ENST00000229330 GALNT7Q86SF2 657 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 BEST3Q8N1M1 668 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 ADAMTS19Q8TE59 1207 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 RGMAQ96B86 450 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 SLC45A1Q9Y2W3 748 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 LOC285095A0A1B0GVY8 99 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 HTR6P50406 440 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 STXBP1P61764 594 aaKnown RBP13.25□□□□□ -0.29
HCFC2-201ENST00000229330 FPGSQ05932 587 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 GRIN2CQ14957 1233 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 ARFGAP1Q8N6T3 406 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 OR8D1Q8WZ84 308 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 MRPL15Q9P015 296 aaKnown RBP13.25□□□□□ -0.29
HCFC2-201ENST00000229330 ACSL5Q9ULC5 683 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 MYH11P35749 1972 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 A0A0G2JN53 185 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 LRRTM2O43300 516 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 PRAMEF11O60813 436 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 AOC2O75106 756 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 ERVPABLB-1P60509 514 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 TAGLNQ01995 201 aaKnown RBP13.24□□□□□ -0.29
HCFC2-201ENST00000229330 SP140Q13342 867 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 MICAQ29983 383 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 SLC35F1Q5T1Q4 408 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 HDDC3Q8N4P3 179 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 B3GNT7Q8NFL0 401 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 EPYCQ99645 322 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 TRMT61BQ9BVS5 477 aaKnown RBP13.24□□□□□ -0.29
HCFC2-201ENST00000229330 RGCCQ9H4X1 137 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 NT5DC2Q9H857 520 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 FBXO10Q9UK96 956 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 MRTO4Q9UKD2 239 aaKnown RBP13.24□□□□□ -0.29
HCFC2-201ENST00000229330 NEDD8-MDP1E9PL57 170 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 FMO6PO60774 539 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 GABARAPO95166 117 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 AGR2O95994 175 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 LINC00299Q6ZSB3 139 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 GALNT13Q8IUC8 556 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 OR10G6Q8NH81 332 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 FUBP3Q96I24 572 aaKnown RBP eCLIP13.24□□□□□ -0.29
HCFC2-201ENST00000229330 OR51B5Q9H339 312 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 GPR45Q9Y5Y3 372 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 INHAP05111 366 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 C21orf33P30042 268 aaPredicted RBP13.24□□□□□ -0.29
HCFC2-201ENST00000229330 PITPNBP48739 271 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 AGTRAPQ6RW13 159 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 C3P1Q6ZMU1 363 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 TP53INP2Q8IXH6 220 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 NEK7Q8TDX7 302 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 GRHL3Q8TE85 626 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 C7orf34Q96L11 122 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 ZNF700Q9H0M5 742 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 DLGAP4Q9Y2H0 992 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 DNMT3AQ9Y6K1 912 aaPredicted RBP13.24□□□□□ -0.29
HCFC2-201ENST00000229330 C5P01031 1676 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 SYN3O14994 580 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 GKN3PP0CG01 181 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 ENDOUP21128 410 aaKnown RBP13.24□□□□□ -0.29
HCFC2-201ENST00000229330 CMPK1P30085 196 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 ARSDP51689 593 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 GPR68Q15743 365 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 UPF1Q92900 1129 aaKnown RBP eCLIP13.24□□□□□ -0.29
HCFC2-201ENST00000229330 C3orf30Q96M34 536 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 RIPOR3Q96MK2 946 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 TRIB3Q96RU7 358 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 P2RY13Q9BPV8 354 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 PLEKHA1Q9HB21 404 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 TEX10Q9NXF1 929 aaPredicted RBP13.24□□□□□ -0.29
HCFC2-201ENST00000229330 VAPAQ9P0L0 249 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 LOC102723532A0A0G2JNH3 316 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 ATP1B2P14415 290 aaPredicted RBP13.24□□□□□ -0.29
HCFC2-201ENST00000229330 KELP23276 732 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 PKLRP30613 574 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 FGL2Q14314 439 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 VARS2Q5ST30 1063 aaKnown RBP13.24□□□□□ -0.29
HCFC2-201ENST00000229330 TCEAL3Q969E4 200 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 FUBP1Q96AE4 644 aaKnown RBP13.24□□□□□ -0.29
HCFC2-201ENST00000229330 CD300AQ9UGN4 299 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 CDH7Q9ULB5 785 aa13.24□□□□□ -0.29
HCFC2-201ENST00000229330 MYH1P12882 1939 aa13.23□□□□□ -0.29
HCFC2-201ENST00000229330 MYH4Q9Y623 1939 aa13.23□□□□□ -0.29
HCFC2-201ENST00000229330 ARNTLO00327 626 aa13.23□□□□□ -0.29
HCFC2-201ENST00000229330 ARPC5O15511 151 aa13.23□□□□□ -0.29
HCFC2-201ENST00000229330 MAFKO60675 156 aa13.23□□□□□ -0.29
HCFC2-201ENST00000229330 BEST1O76090 585 aa13.23□□□□□ -0.29
HCFC2-201ENST00000229330 MTNR1AP48039 350 aa13.23□□□□□ -0.29
HCFC2-201ENST00000229330 ARFRP1Q13795 201 aa13.23□□□□□ -0.29
HCFC2-201ENST00000229330 MS4A13Q5J8X5 152 aa13.23□□□□□ -0.29
HCFC2-201ENST00000229330 UBXN11Q5T124 520 aa13.23□□□□□ -0.29
HCFC2-201ENST00000229330 GPRC6AQ5T6X5 926 aa13.23□□□□□ -0.29
HCFC2-201ENST00000229330 PRAMEF13Q5VWM6 474 aa13.23□□□□□ -0.29
HCFC2-201ENST00000229330 PARGQ86W56 976 aa13.23□□□□□ -0.29
HCFC2-201ENST00000229330 PROKR2Q8NFJ6 384 aa13.23□□□□□ -0.29
HCFC2-201ENST00000229330 NPLOC4Q8TAT6 608 aa13.23□□□□□ -0.29
HCFC2-201ENST00000229330 IL12RB2Q99665 862 aa13.23□□□□□ -0.29
HCFC2-201ENST00000229330 GLTPQ9NZD2 209 aa13.23□□□□□ -0.29
HCFC2-201ENST00000229330 F8W036 122 aa13.23□□□□□ -0.29
HCFC2-201ENST00000229330 ARHGEF15O94989 841 aa13.23□□□□□ -0.29
HCFC2-201ENST00000229330 FARS2O95363 451 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms