RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 GINS4Q9BRT9 223 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 UBQLN2Q9UHD9 624 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 E7EQ34 232 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 ONECUT3O60422 494 aaPredicted RBP13.89□□□□□ -0.19
PRDM4-201ENST00000228437 CLTBP09497 229 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 PRG2P13727 222 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 LHCGRP22888 699 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 SSX1Q16384 188 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 RFLNAQ6ZTI6 216 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 OR51G2Q8NGK0 314 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 DNAJA4Q8WW22 397 aaPredicted RBP13.89□□□□□ -0.19
PRDM4-201ENST00000228437 C3orf14Q9HBI5 128 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 IL26Q9NPH9 171 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 IL17CQ9P0M4 197 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 TEX13CA0A0J9YWL9 993 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 KHDRBS3O75525 346 aaKnown RBP13.89□□□□□ -0.19
PRDM4-201ENST00000228437 CSKP41240 450 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 HBA1P69905 142 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 HSF2Q03933 536 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 GAB1Q13480 694 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 KRT33BQ14525 404 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 PCBP1Q15365 356 aaKnown RBP eCLIP13.89□□□□□ -0.19
PRDM4-201ENST00000228437 YIF1BQ5BJH7 314 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 KIAA1958Q8N8K9 716 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 RFT1Q96AA3 541 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 KCNK12Q9HB15 430 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 PFDN2Q9UHV9 154 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 MAN2B2Q9Y2E5 1009 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 PCDHB7Q9Y5E2 793 aa13.89□□□□□ -0.19
PRDM4-201ENST00000228437 CFAP20Q9Y6A4 193 aaKnown RBP13.89□□□□□ -0.19
PRDM4-201ENST00000228437 A0A1B0GVM2 712 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 RAB36O95755 333 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 IGSF6O95976 241 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 PKLRP30613 574 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 CDH11P55287 796 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 SRFBP1Q8NEF9 429 aaKnown RBP13.88□□□□□ -0.19
PRDM4-201ENST00000228437 CACNG6Q9BXT2 260 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 DPAGT1Q9H3H5 408 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 RBFOX1Q9NWB1 397 aaKnown RBP13.88□□□□□ -0.19
PRDM4-201ENST00000228437 SCML2Q9UQR0 700 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 NAALAD2Q9Y3Q0 740 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 UTRNP46939 3433 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 M0R3H8 397 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 SRP9P49458 86 aaKnown RBP13.88□□□□□ -0.19
PRDM4-201ENST00000228437 PPP3R1P63098 170 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 SLBPQ14493 270 aaKnown RBP eCLIP13.88□□□□□ -0.19
PRDM4-201ENST00000228437 BHLHA9Q7RTU4 235 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 PTOV1Q86YD1 416 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 TMC8Q8IU68 726 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 OR8J1Q8NGP2 316 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 BTN2A2Q8WVV5 523 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 PEX13Q92968 403 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 SCRN2Q96FV2 425 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 BBS4Q96RK4 519 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 SLC28A3Q9HAS3 691 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 HHATLQ9HCP6 504 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 MAB21L2Q9Y586 359 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 MCM3APO60318 1980 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 SLC22A5O76082 557 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 VIPR1P32241 457 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 GALNT7Q86SF2 657 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 TMEM145Q8NBT3 493 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 AP2M1Q96CW1 435 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 COQ10AQ96MF6 247 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 ERMAPQ96PL5 475 aaPredicted RBP13.88□□□□□ -0.19
PRDM4-201ENST00000228437 BARHL1Q9BZE3 327 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 CSNK1G1Q9HCP0 422 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 FKBP14Q9NWM8 211 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 SRRDQ9UH36 339 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 PCM1Q15154 2024 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 FXYD6-FXYD2A0A087WZ82 144 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 A0A0X1KG70 313 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 ZNF670-ZNF695F2Z2N8 137 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 FRS3O43559 492 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 HNF1BP35680 557 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 PCDH1Q08174 1060 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 LINGO2Q7L985 606 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 RBM45Q8IUH3 476 aaKnown RBP13.88□□□□□ -0.19
PRDM4-201ENST00000228437 TRMT61AQ96FX7 289 aaKnown RBP13.88□□□□□ -0.19
PRDM4-201ENST00000228437 C17orf62Q9BQA9 187 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 FUZQ9BT04 418 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 C2orf49Q9BVC5 232 aaPredicted RBP13.88□□□□□ -0.19
PRDM4-201ENST00000228437 FXYD6Q9H0Q3 95 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 ACOXLQ9NUZ1 547 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 CDV3Q9UKY7 258 aaKnown RBP13.88□□□□□ -0.19
PRDM4-201ENST00000228437 A3GALT2U3KPV4 340 aa13.88□□□□□ -0.19
PRDM4-201ENST00000228437 DNAJC25-GNG10A0A024R161 153 aa13.87□□□□□ -0.19
PRDM4-201ENST00000228437 L7N2F9 121 aa13.87□□□□□ -0.19
PRDM4-201ENST00000228437 MRPL3P09001 348 aaKnown RBP13.87□□□□□ -0.19
PRDM4-201ENST00000228437 OR1D2P34982 312 aa13.87□□□□□ -0.19
PRDM4-201ENST00000228437 KCNJ10P78508 379 aa13.87□□□□□ -0.19
PRDM4-201ENST00000228437 CRYZQ08257 329 aaKnown RBP13.87□□□□□ -0.19
PRDM4-201ENST00000228437 RBBP4Q09028 425 aa13.87□□□□□ -0.19
PRDM4-201ENST00000228437 STX4Q12846 297 aa13.87□□□□□ -0.19
PRDM4-201ENST00000228437 INSL4Q14641 139 aa13.87□□□□□ -0.19
PRDM4-201ENST00000228437 MANEALQ5VSG8 457 aa13.87□□□□□ -0.19
PRDM4-201ENST00000228437 ZNF551Q7Z340 670 aaPredicted RBP13.87□□□□□ -0.19
PRDM4-201ENST00000228437 LINC01465Q8N7H1 131 aa13.87□□□□□ -0.19
PRDM4-201ENST00000228437 SECISBP2Q96T21 854 aaKnown RBP13.87□□□□□ -0.19
PRDM4-201ENST00000228437 OR6C2Q9NZP2 312 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms