RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 EMC8O43402 210 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 IQCF3P0C7M6 154 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 GTF2F2P13984 249 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 F8A1P23610 371 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 RORAP35398 523 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 ACADVLP49748 655 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 TBPL1P62380 186 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 RHEBQ15382 184 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 PGM2L1Q6PCE3 622 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 SLC39A5Q6ZMH5 540 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 TBC1D15Q8TC07 691 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 FAM3CQ92520 227 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 PCDHGB6Q9Y5F9 930 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 ABLIM1O14639 778 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 RFPL2O75678 378 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 CKMT2P17540 419 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 XRCC1P18887 633 aaPredicted RBP12.7□□□□□ -0.38
COL1A1-201ENST00000225964 RBMXP38159 391 aaKnown RBP12.7□□□□□ -0.38
COL1A1-201ENST00000225964 HNRNPKP61978 463 aaKnown RBP eCLIP12.7□□□□□ -0.38
COL1A1-201ENST00000225964 GTF2IRD2BQ6EKJ0 949 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 LRFN4Q6PJG9 635 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 GTF2IRD2Q86UP8 949 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 IL17RCQ8NAC3 791 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 GRPEL2Q8TAA5 225 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 IL17FQ96PD4 163 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 SRA1Q9HD15 236 aaKnown RBP12.7□□□□□ -0.38
COL1A1-201ENST00000225964 PIAS3Q9Y6X2 628 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 A8MVJ9 347 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 MPPED1O15442 326 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 IFNA7P01567 189 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 MPC1LP0DKB6 136 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 HHEXQ03014 270 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 RUNX3Q13761 415 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 EIF5AL1Q6IS14 154 aaKnown RBP12.7□□□□□ -0.38
COL1A1-201ENST00000225964 OR5J2Q8NH18 312 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 FBRSL1Q9HCM7 1045 aaKnown RBP12.7□□□□□ -0.38
COL1A1-201ENST00000225964 CD320Q9NPF0 282 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 COQ4Q9Y3A0 265 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 SEMA4FO95754 770 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 TPTEP56180 551 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 FGL2Q14314 439 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 DHCR24Q15392 516 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 OR4C11Q6IEV9 310 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 DPY19L3Q6ZPD9 716 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 TOR1AIP2Q8NFQ8 470 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 SLC35B2Q8TB61 432 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 SLC25A44Q96H78 314 aaPredicted RBP12.7□□□□□ -0.38
COL1A1-201ENST00000225964 CDH10Q9Y6N8 788 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 TRAV6A0A075B6T7 132 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 H7C417 338 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 FLRT2O43155 660 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 DFNA5O60443 496 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 RNH1P13489 461 aaKnown RBP12.7□□□□□ -0.38
COL1A1-201ENST00000225964 AMY2BP19961 511 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 CRISP1P54107 249 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 MEP1AQ16819 746 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 SLC36A3Q495N2 470 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 ATAD3CQ5T2N8 411 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 ZSWIM9Q86XI8 627 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 RHBDD1Q8TEB9 315 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 MEN1O00255 615 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 FPR1P21462 350 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 GSTM2P28161 218 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 MAGEA8P43361 318 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 LRRC37A5PQ49AS3 106 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 FIGNL1Q6PIW4 674 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 ZNF584Q8IVC4 421 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 SPAG16Q8N0X2 631 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 KRTCAP2Q8N6L1 136 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 OR9I1Q8NGQ6 314 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 ENAMQ9NRM1 1142 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 GIMAP2Q9UG22 337 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 CLEC4EQ9ULY5 219 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 ANKRD26Q9UPS8 1709 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 ZNF217O75362 1048 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 HRH2P25021 359 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 RABIFP47224 123 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 HNRNPA0Q13151 305 aaKnown RBP12.69□□□□□ -0.38
COL1A1-201ENST00000225964 KCTD18Q6PI47 426 aaPredicted RBP12.69□□□□□ -0.38
COL1A1-201ENST00000225964 EPGNQ6UW88 154 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 PROKR1Q8TCW9 393 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 HOXB13Q92826 284 aaPredicted RBP12.69□□□□□ -0.38
COL1A1-201ENST00000225964 MROQ9BYG7 248 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 HEMK1Q9Y5R4 338 aaPredicted RBP12.69□□□□□ -0.38
COL1A1-201ENST00000225964 NTSR1P30989 418 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 IST1P53990 364 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 ABHD18Q0P651 414 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 ATXN7L3Q14CW9 347 aaPredicted RBP12.69□□□□□ -0.38
COL1A1-201ENST00000225964 C16orf58Q96GQ5 468 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 ZBTB26Q9HCK0 441 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 KCNIP3Q9Y2W7 256 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 HCN4Q9Y3Q4 1203 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 XPNPEP2O43895 674 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 NR0B2Q15466 257 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 VTCN1Q7Z7D3 282 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 NANOS1Q8WY41 292 aaKnown RBP12.69□□□□□ -0.38
COL1A1-201ENST00000225964 FOXJ1Q92949 421 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 TMEM184CQ9NVA4 438 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 A0A1W2PP18 115 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 SLC16A5O15375 505 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms