RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 HMGN4O00479 90 aa28.1■■■□□ 2.09
PABPN1-201ENST00000216727 AIFM1O95831 613 aa28.1■■■□□ 2.09
PABPN1-201ENST00000216727 ETS2P15036 469 aa28.1■■■□□ 2.09
PABPN1-201ENST00000216727 UGT2B7P16662 529 aa28.1■■■□□ 2.09
PABPN1-201ENST00000216727 NCBP2P52298 156 aaKnown RBP eCLIP28.1■■■□□ 2.098e-21■□□□□ 9.8
PABPN1-201ENST00000216727 TDGQ13569 410 aa28.1■■■□□ 2.09
PABPN1-201ENST00000216727 FBXO42Q6P3S6 717 aa28.1■■■□□ 2.09
PABPN1-201ENST00000216727 ZNF773Q6PK81 442 aa28.1■■■□□ 2.09
PABPN1-201ENST00000216727 GALNT15Q8N3T1 639 aa28.1■■■□□ 2.09
PABPN1-201ENST00000216727 ATG16L2Q8NAA4 619 aa28.1■■■□□ 2.09
PABPN1-201ENST00000216727 SETD9Q8NE22 299 aa28.1■■■□□ 2.09
PABPN1-201ENST00000216727 NMD3Q96D46 503 aaKnown RBP28.1■■■□□ 2.09
PABPN1-201ENST00000216727 NPLQ9BXD5 320 aaPredicted RBP28.1■■■□□ 2.09
PABPN1-201ENST00000216727 UBE2ZQ9H832 354 aaPredicted RBP28.1■■■□□ 2.09
PABPN1-201ENST00000216727 PAPOLBQ9NRJ5 636 aaKnown RBP28.1■■■□□ 2.09
PABPN1-201ENST00000216727 PTTG2Q9NZH5 202 aa28.1■■■□□ 2.09
PABPN1-201ENST00000216727 HSPE1-MOB4S4R3N1 261 aa28.1■■■□□ 2.09
PABPN1-201ENST00000216727 SPTY2D1-AS1A0A0U1RR47 76 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 PGRMC2O15173 223 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 PRKRAO75569 313 aaKnown RBP28.09■■■□□ 2.09
PABPN1-201ENST00000216727 VIPP01282 170 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 TNFRSF1BP20333 461 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 GPC1P35052 558 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 OR1E2P47887 323 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 SH3BGRP55822 239 aaPredicted RBP28.09■■■□□ 2.09
PABPN1-201ENST00000216727 TP53BP2Q13625 1128 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 CTU2Q2VPK5 515 aaKnown RBP28.09■■■□□ 2.09
PABPN1-201ENST00000216727 ZBED5Q49AG3 693 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 SLC48A1Q6P1K1 146 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 TM4SF19Q96DZ7 209 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 TMEM19Q96HH6 336 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 KRT84Q9NSB2 600 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 ACTR10Q9NZ32 417 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 FBXW2Q9UKT8 454 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 ARHGEF17Q96PE2 2063 aaPredicted RBP28.09■■■□□ 2.09
PABPN1-201ENST00000216727 FAM221BA6H8Z2 402 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 WASHC1A8K0Z3 465 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 TNFRSF11BO00300 401 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 PROM1O43490 865 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 SH3BP5O60239 455 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 PRAMEF10O60809 474 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 DNAJB5O75953 348 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 BCHEP06276 602 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 MAGP20916 626 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 EIF2B5Q13144 721 aaKnown RBP28.09■■■□□ 2.09
PABPN1-201ENST00000216727 TOP3AQ13472 1001 aaPredicted RBP28.09■■■□□ 2.09
PABPN1-201ENST00000216727 MEP1AQ16819 746 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 CHRDL2Q6WN34 429 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 GPR141Q7Z602 305 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 RIBC2Q9H4K1 309 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 SEMA3GQ9NS98 782 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 CPNE7Q9UBL6 633 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 KLK4Q9Y5K2 254 aa28.09■■■□□ 2.09
PABPN1-201ENST00000216727 GLOD5A6NK44 160 aa28.08■■■□□ 2.09
PABPN1-201ENST00000216727 OR5K4A6NMS3 321 aa28.08■■■□□ 2.09
PABPN1-201ENST00000216727 PDE9AO76083 593 aa28.08■■■□□ 2.09
PABPN1-201ENST00000216727 SLC35G6P0C7Q6 338 aa28.08■■■□□ 2.09
PABPN1-201ENST00000216727 UBE2IP63279 158 aaKnown RBP28.08■■■□□ 2.09
PABPN1-201ENST00000216727 B3GNT6Q6ZMB0 384 aa28.08■■■□□ 2.09
PABPN1-201ENST00000216727 SMYD1Q8NB12 490 aa28.08■■■□□ 2.09
PABPN1-201ENST00000216727 OR4C15Q8NGM1 316 aa28.08■■■□□ 2.09
PABPN1-201ENST00000216727 SFXN5Q8TD22 340 aa28.08■■■□□ 2.09
PABPN1-201ENST00000216727 CNRIP1Q96F85 164 aaPredicted RBP28.08■■■□□ 2.09
PABPN1-201ENST00000216727 OR2A5Q96R48 311 aa28.08■■■□□ 2.09
PABPN1-201ENST00000216727 ADNPQ9H2P0 1102 aa28.08■■■□□ 2.09
PABPN1-201ENST00000216727 SERHL2Q9H4I8 314 aa28.08■■■□□ 2.09
PABPN1-201ENST00000216727 BLOC1S6Q9UL45 172 aa28.08■■■□□ 2.09
PABPN1-201ENST00000216727 TESMINQ9Y4I5 508 aa28.08■■■□□ 2.09
PABPN1-201ENST00000216727 ENTPD2Q9Y5L3 495 aa28.08■■■□□ 2.09
PABPN1-201ENST00000216727 KIR2DS5A0A0G2JLQ3 304 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 A0A0G2JNG1 304 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 OR6C74A6NCV1 312 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 KIR2DS3K7RE56 304 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 B4GAT1O43505 415 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 IL7RP16871 459 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 XCR1P46094 333 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 GABARAPL2P60520 117 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 RELAQ04206 551 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 KIR2DS5Q14953 304 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 MAPK11Q15759 364 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 TRIM73Q86UV7 250 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 ZNF687Q8N1G0 1237 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 KCT2Q8NC54 265 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 SUN3Q8TAQ9 357 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 THAP11Q96EK4 314 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 SLC35G5Q96KT7 338 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 FCRL4Q96PJ5 515 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 GPR174Q9BXC1 333 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 TCEAL2Q9H3H9 227 aaPredicted RBP28.08■■■□□ 2.08
PABPN1-201ENST00000216727 RSL24D1Q9UHA3 163 aaKnown RBP28.08■■■□□ 2.08
PABPN1-201ENST00000216727 ENTPD4Q9Y227 616 aa28.08■■■□□ 2.08
PABPN1-201ENST00000216727 ERAL1O75616 437 aaKnown RBP28.07■■■□□ 2.08
PABPN1-201ENST00000216727 POLR2CP19387 275 aaPredicted RBP28.07■■■□□ 2.08
PABPN1-201ENST00000216727 CD6P30203 668 aa28.07■■■□□ 2.08
PABPN1-201ENST00000216727 TTKP33981 857 aa28.07■■■□□ 2.08
PABPN1-201ENST00000216727 CLK3P49761 638 aaKnown RBP28.07■■■□□ 2.08
PABPN1-201ENST00000216727 KCNC4Q03721 635 aa28.07■■■□□ 2.08
PABPN1-201ENST00000216727 RAPSNQ13702 412 aa28.07■■■□□ 2.08
PABPN1-201ENST00000216727 CEBPEQ15744 281 aa28.07■■■□□ 2.08
PABPN1-201ENST00000216727 LRIT3Q3SXY7 679 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms