RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 PRKCAP17252 672 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 OXTRP30559 389 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 MAP2K3P46734 347 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 RAB35Q15286 201 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 ACSBG2Q5FVE4 666 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 TIGD3Q6B0B8 471 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 PLEKHG7Q6ZR37 379 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 ZNF572Q7Z3I7 529 aaPredicted RBP14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 CMTM1Q8IZ96 169 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 LRRC52Q8N7C0 313 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 OR4E2Q8NGC2 313 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 WNT9AO14904 365 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 NDST2P52849 883 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 SLX4IPQ5VYV7 408 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 FRG2Q64ET8 278 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 SNX27Q96L92 541 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 HS6ST2Q96MM7 605 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 FRG2BQ96QU4 278 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 ACTR10Q9NZ32 417 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 NPIPA7E9PJI5 369 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 RTCAO00442 366 aaKnown RBP14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 BHLHE40O14503 412 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 NPIPA8P0DM63 369 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 NAA10P41227 235 aaPredicted RBP14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 GTF2BQ00403 316 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 SRYQ05066 204 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 PTCHD3Q3KNS1 767 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 ZNF705AQ6ZN79 300 aaPredicted RBP14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 AQP12BA6NM10 295 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 CREG1O75629 220 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 ADRA1BP35368 520 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 CLCNKBP51801 687 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 GRIK5Q16478 980 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 MOGQ16653 247 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 LRIT3Q3SXY7 679 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 TSTD2Q5T7W7 516 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 XYLT1Q86Y38 959 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 NATD1Q8N6N6 113 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 C2orf42Q9NWW7 574 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 UBFD1O14562 309 aaKnown RBP14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 PBX3P40426 434 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 STT3AP46977 705 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 ACTA2P62736 377 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 ACTG2P63267 376 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 SNTB2Q13425 540 aaKnown RBP14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 EARS2Q5JPH6 523 aaKnown RBP14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 CDC6Q99741 560 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 P2RY13Q9BPV8 354 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 NUSAP1Q9BXS6 441 aaKnown RBP14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 RBCK1Q9BYM8 510 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 OSBPL7Q9BZF2 842 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 SLC32A1Q9H598 525 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 PREX2Q70Z35 1606 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 SEC14L6B5MCN3 397 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 DNM1LO00429 736 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 NLGN4XQ8N0W4 816 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 OR2T33Q8NG76 320 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 WASH4PA8MWX3 477 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 ATE1O95260 518 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 OR4Q2P0C623 313 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 ADRB3P13945 408 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 KCNC4Q03721 635 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 MAP1SQ66K74 1059 aaPredicted RBP14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 ZNF610Q8N9Z0 462 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 PAQR8Q8TEZ7 354 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 PLD4Q96BZ4 506 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 ADAM19Q9H013 955 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 IRS2Q9Y4H2 1338 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 ADM5C9JUS6 153 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 PRMT2P55345 433 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 ACY1Q03154 408 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 CCINQ13939 588 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 KCTD18Q6PI47 426 aaPredicted RBP14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 BAIAP2L2Q6UXY1 529 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 JOSD2Q8TAC2 188 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 FBXL20Q96IG2 436 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 HSH2DQ96JZ2 352 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 YTHDF1Q9BYJ9 559 aaKnown RBP14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 TDRD6O60522 2096 aaKnown RBP14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 TTLL8A6PVC2 850 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 MT-ND2P03891 347 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 CDKN2BP42772 138 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 ZSWIM9Q86XI8 627 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 GATSQ8NAP1 163 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 SLC35F5Q8WV83 523 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 GTF2H4Q92759 462 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 SLC28A3Q9HAS3 691 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 PRDM9Q9NQV7 894 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 CRYZL1O95825 349 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 NKX2-5P52952 324 aaPredicted RBP14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 RIPPLY1Q0D2K3 151 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 HIST2H3PS2Q5TEC6 136 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 DEFB119Q8N690 84 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 TMEM234Q8WY98 164 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 PKP2Q99959 881 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 ZNF559Q9BR84 538 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 LIN28AQ9H9Z2 209 aaKnown RBP14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 IL17RBQ9NRM6 502 aa14.06□□□□□ -0.16
SPTLC2-201ENST00000216484 SLC2A8Q9NY64 477 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms