RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Tmed4Q8R1V4 227 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ocel1Q8VCR9 219 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr561Q8VGZ6 314 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cldn34b2Q9D9N2 209 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tas2r119Q9JKT2 335 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 P01650 108 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 P01653 108 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 B3gnt4Q1RLK6 350 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Mrpl10Q3TBW2 262 aaKnown RBP9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gm2016Q3TQZ4 144 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tmem199Q5SYH2 208 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Dcun1d3Q8K0V2 304 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Clrn1Q8K445 232 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Pttg1ipQ8R143 174 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cd276Q8VE98 316 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tssk4Q9D411 328 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Nectin1Q9JKF6 515 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Eif2s3xQ9Z0N1 472 aaKnown RBP9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Eif2s3yQ9Z0N2 472 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Mterf1bB9EJ57 379 aa9.77□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cldn5O54942 218 aa9.77□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Pdlim1O70400 327 aa9.77□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Acot8P58137 320 aa9.77□□□□□ -0.84
Ubr1-201ENSMUST00000028728 SiaeP70665 541 aa9.77□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Chst2Q80WV3 530 aa9.77□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Prickle2Q80Y24 845 aa9.77□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Yipf4Q8C407 246 aa9.77□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Mterf1aQ8CHZ9 379 aa9.77□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Q8K039 155 aa9.77□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Sav1Q8VEB2 386 aa9.77□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tssk6Q925K9 273 aa9.77□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Mcoln1Q99J21 580 aa9.77□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Alg14Q9D081 217 aa9.77□□□□□ -0.84
Ubr1-201ENSMUST00000028728 BvesQ9ES83 358 aa9.77□□□□□ -0.84
Ubr1-201ENSMUST00000028728 GghQ9Z0L8 317 aa9.77□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cdc42ep5Q9Z0X0 150 aa9.77□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Loxl3Q9Z175 754 aa9.77□□□□□ -0.84
Ubr1-201ENSMUST00000028728 F10O88947 481 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 P58686 83 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tmem231Q3U284 315 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Sat2Q6P8J2 170 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr1198Q7TR12 308 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Nt5dc1Q8C5P5 467 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Q8R2K8 148 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr692Q8VF03 329 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr342Q8VGK7 312 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Elmod3Q91YP6 381 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr716Q9EPG6 314 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr1032A2ATE5 310 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Skint2A7XUX6 400 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr592E9PYB3 312 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm3327F7C9A1 213 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 TstP52196 297 aaKnown RBP9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 MitfQ08874 526 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Alg6Q3TAE8 507 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Crtc2Q3U182 692 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Fam46cQ5SSF7 391 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Fndc3bQ6NWW9 1207 aaKnown RBP9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Prr5Q812A5 387 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfm2Q8BM13 448 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr1033Q8VFK5 310 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 ApofQ91V80 315 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Sppl2aQ9JJF9 523 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Adam28Q9JLN6 793 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Vmn1r49Q9WUF1 310 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm33543A0A1B0GSI5 81 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Grin3aA2AIR5 1135 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr1306A2BFL7 312 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Pot1bH7BX60 640 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm21972J3QN38 98 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Ninj1O70131 152 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 SctrQ5FWI2 447 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Ccdc36Q6PDM4 574 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr1045Q7TR80 315 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Padi6Q8K3V4 682 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Apbb3Q8R1C9 486 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Fcf1Q9CTH6 198 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 NaxdQ9CZ42 343 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 MmabQ9D273 237 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Prl8a8Q9DAS4 241 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 GabarapQ9DCD6 117 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 ScelQ9EQG3 652 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Spock2Q9ER58 423 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Dclre1aQ9JIC3 1026 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Eci2Q9WUR2 391 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Ahnak2E9PYB0 1738 aaKnown RBP9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr1375A0A0N4SUP0 313 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Skint4A7TZF3 474 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Vmn2r52L7N2B2 852 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 OxtrP97926 388 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Galnt12Q8BGT9 576 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Alyref2Q9JJW6 218 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cnot9Q9JKY0 299 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tacr2P30549 384 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Sgk494Q5SYL1 278 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tmem151aQ6GQT5 468 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Kif18bQ6PFD6 834 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 P4ha3Q6W3F0 542 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Lrrc39Q8BGI7 337 aa9.77□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slc35f1Q8BGK5 408 aa9.77□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms