RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 ZNF764Q96H86 408 aaPredicted RBP11.6□□□□□ -0.55
LINC00339-213ENST00000642137 CSF3RQ99062 836 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 PRPF18Q99633 342 aaKnown RBP11.6□□□□□ -0.55
LINC00339-213ENST00000642137 GPR87Q9BY21 358 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 ACTL8Q9H568 366 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 ZNF385DQ9H6B1 395 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 SAR1AQ9NR31 198 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 PRTFDC1Q9NRG1 225 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 LANCL2Q9NS86 450 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 ATP6V1HQ9UI12 483 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 NXT1Q9UKK6 140 aaKnown RBP11.6□□□□□ -0.55
LINC00339-213ENST00000642137 FARSAQ9Y285 508 aaKnown RBP11.6□□□□□ -0.55
LINC00339-213ENST00000642137 MMACHCQ9Y4U1 282 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 COPG1Q9Y678 874 aaKnown RBP11.6□□□□□ -0.55
LINC00339-213ENST00000642137 DMXL1Q9Y485 3027 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 C21orf140B9A014 251 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 AKAP10O43572 662 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 B4GALT2O60909 372 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 LRATO95237 230 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 CYC1P08574 325 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 FURINP09958 794 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 LIPCP11150 499 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 PPP2R1BP30154 601 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 STAT5AP42229 794 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 RPS15P62841 145 aaKnown RBP11.59□□□□□ -0.55
LINC00339-213ENST00000642137 SRSF11Q05519 484 aaKnown RBP11.59□□□□□ -0.55
LINC00339-213ENST00000642137 ACTN3Q08043 901 aaPredicted RBP11.59□□□□□ -0.55
LINC00339-213ENST00000642137 PDE7AQ13946 482 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 OR52E8Q6IFG1 317 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 QSOX2Q6ZRP7 698 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 RIPOR1Q6ZS17 1223 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 NATD1Q8N6N6 113 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 FAM47BQ8NA70 645 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 TMEM52Q8NDY8 209 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 CLHC1Q8NHS4 586 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 CDC26Q8NHZ8 85 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 CT55Q8WUE5 264 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 GFM2Q969S9 779 aaKnown RBP11.59□□□□□ -0.55
LINC00339-213ENST00000642137 TESCQ96BS2 214 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 COQ8BQ96D53 544 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 MARK4Q96L34 752 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 ZBTB18Q99592 522 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 CTSFQ9UBX1 484 aa11.59□□□□□ -0.55
LINC00339-213ENST00000642137 SYNDIG1LA6NDD5 238 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 WASHC1A8K0Z3 465 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 TERTO14746 1132 aaKnown RBP11.58□□□□□ -0.56
LINC00339-213ENST00000642137 SCAMP2O15127 329 aaKnown RBP11.58□□□□□ -0.56
LINC00339-213ENST00000642137 SLC22A2O15244 555 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 CNOT3O75175 753 aaKnown RBP11.58□□□□□ -0.56
LINC00339-213ENST00000642137 JRKO75564 520 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 PRKRAO75569 313 aaKnown RBP11.58□□□□□ -0.56
LINC00339-213ENST00000642137 KLF7O75840 302 aaPredicted RBP11.58□□□□□ -0.56
LINC00339-213ENST00000642137 DCTN3O75935 186 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 GPR75O95800 540 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 RECKO95980 971 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 PIK3R1P27986 724 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 IL12AP29459 219 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 HPCAL1P37235 193 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 ALDH9A1P49189 494 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 HNRNPFP52597 415 aaKnown RBP11.58□□□□□ -0.56
LINC00339-213ENST00000642137 EMP2P54851 167 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 BTG2P78543 158 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 NCF4Q15080 339 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 UGT8Q16880 541 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 DPY19L1Q2PZI1 675 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 CPTPQ5TA50 214 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 PAOXQ6QHF9 649 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 CAMKMTQ7Z624 323 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 MTDHQ86UE4 582 aaKnown RBP11.58□□□□□ -0.56
LINC00339-213ENST00000642137 LAPTM4BQ86VI4 370 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 TICAM1Q8IUC6 712 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 SCUBE1Q8IWY4 988 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 SAMD14Q8IZD0 417 aaPredicted RBP11.58□□□□□ -0.56
LINC00339-213ENST00000642137 KRTCAP2Q8N6L1 136 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 IL22RA1Q8N6P7 574 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 OR4K14Q8NGD5 310 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 FGF11Q92914 225 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 ANKRD9Q96BM1 317 aaPredicted RBP11.58□□□□□ -0.56
LINC00339-213ENST00000642137 PPCDCQ96CD2 204 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 TEX37Q96LM6 180 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 PTCHD1Q96NR3 888 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 SPSB2Q99619 263 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 EFHD1Q9BUP0 239 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 NMUR2Q9GZQ4 415 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 MYLK2Q9H1R3 596 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 CLMPQ9H6B4 373 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 MIEF1Q9NQG6 463 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 ATAD3AQ9NVI7 634 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 SH3BP4Q9P0V3 963 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 DKK4Q9UBT3 224 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 KCND3Q9UK17 655 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 PADI2Q9Y2J8 665 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 PCDHGA6Q9Y5G7 932 aa11.58□□□□□ -0.56
LINC00339-213ENST00000642137 NUP210LQ5VU65 1888 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 LOC101059948A0A1B0GTJ6 334 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 DYTNA2CJ06 578 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 FAM234BA2RU67 622 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 GLOD5A6NK44 160 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 FCHO1O14526 889 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 PCDH17O14917 1159 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms