RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 ARL8BQ9NVJ2 186 aa16.47■□□□□ 0.23
PHGDH-230ENST00000641927 FOXJ2Q9P0K8 574 aa16.47■□□□□ 0.23
PHGDH-230ENST00000641927 IFT80Q9P2H3 777 aaPredicted RBP16.47■□□□□ 0.23
PHGDH-230ENST00000641927 ATP6V1HQ9UI12 483 aa16.47■□□□□ 0.23
PHGDH-230ENST00000641927 PCDHGA8Q9Y5G5 932 aa16.47■□□□□ 0.23
PHGDH-230ENST00000641927 KNTC1P50748 2209 aa16.47■□□□□ 0.23
PHGDH-230ENST00000641927 ANGPT2O15123 496 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 JRKO75564 520 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 UBOX5O94941 541 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 PGRP06401 933 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 FHP07954 510 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 DDX5P17844 614 aaKnown RBP16.46■□□□□ 0.23
PHGDH-230ENST00000641927 RBMS1P29558 406 aaKnown RBP16.46■□□□□ 0.23
PHGDH-230ENST00000641927 HNRNPFP52597 415 aaKnown RBP16.46■□□□□ 0.23
PHGDH-230ENST00000641927 SLC13A2Q13183 592 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 PDE7AQ13946 482 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 MMEL1Q495T6 779 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 ZNF385BQ569K4 471 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 VWA2Q5GFL6 755 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 MLIPQ5VWP3 458 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 FAM91A1Q658Y4 838 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 OR4F3Q6IEY1 312 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 SLC48A1Q6P1K1 146 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 PRSS58Q8IYP2 241 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 TMEM52Q8NDY8 209 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 RP9Q8TA86 221 aaKnown RBP16.46■□□□□ 0.23
PHGDH-230ENST00000641927 OR52E6Q96RD3 313 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 SLC25A23Q9BV35 468 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 DUSP26Q9BV47 211 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 MKKSQ9NPJ1 570 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-230ENST00000641927 SLC22A11Q9NSA0 550 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 EHD3Q9NZN3 535 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 CTSFQ9UBX1 484 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 ZNF282Q9UDV7 671 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-230ENST00000641927 PSME2Q9UL46 239 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 PTPRBP23467 1997 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 CLDN4O14493 209 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 CFLARO15519 480 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 LDB3O75112 727 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 CBX6O95503 412 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 CAPN3P20807 821 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 EFNA1P20827 205 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-230ENST00000641927 PLA2G5P39877 138 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 PLIN5Q00G26 463 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 ID2Q02363 134 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 OCA2Q04671 838 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 FOXC1Q12948 553 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 KRT72Q14CN4 511 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 MINDY4Q4G0A6 757 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 ZNF385CQ66K41 422 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-230ENST00000641927 FAM199XQ6PEV8 388 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-230ENST00000641927 C6orf89Q6UWU4 347 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 C6orf15Q6UXA7 325 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-230ENST00000641927 COX15Q7KZN9 410 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 OR4N5Q8IXE1 308 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 CIDECQ96AQ7 238 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-230ENST00000641927 LRFN5Q96NI6 719 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 DPH2Q9BQC3 489 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-230ENST00000641927 GIMAP4Q9NUV9 329 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 GPN3Q9UHW5 284 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-230ENST00000641927 TAGLN3Q9UI15 199 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 ENTPD4Q9Y227 616 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 NDUFAF1Q9Y375 327 aa16.46■□□□□ 0.23
PHGDH-230ENST00000641927 BMP10O95393 424 aa16.45■□□□□ 0.22
PHGDH-230ENST00000641927 CCNYL3P0C7X3 344 aa16.45■□□□□ 0.22
PHGDH-230ENST00000641927 C8orf89P0DMQ9 161 aa16.45■□□□□ 0.22
PHGDH-230ENST00000641927 ESRRAP11474 423 aaPredicted RBP16.45■□□□□ 0.22
PHGDH-230ENST00000641927 CPA2P48052 419 aa16.45■□□□□ 0.22
PHGDH-230ENST00000641927 PRSS53Q2L4Q9 553 aa16.45■□□□□ 0.22
PHGDH-230ENST00000641927 LCN10Q6JVE6 187 aa16.45■□□□□ 0.22
PHGDH-230ENST00000641927 ANKRD46Q86W74 232 aa16.45■□□□□ 0.22
PHGDH-230ENST00000641927 VPS37AQ8NEZ2 397 aa16.45■□□□□ 0.22
PHGDH-230ENST00000641927 OR8J2Q8NGG1 315 aa16.45■□□□□ 0.22
PHGDH-230ENST00000641927 DNAJB14Q8TBM8 379 aa16.45■□□□□ 0.22
PHGDH-230ENST00000641927 TANKQ92844 425 aa16.45■□□□□ 0.22
PHGDH-230ENST00000641927 COQ8BQ96D53 544 aa16.45■□□□□ 0.22
PHGDH-230ENST00000641927 NSL1Q96IY1 281 aa16.45■□□□□ 0.22
PHGDH-230ENST00000641927 SLC46A1Q96NT5 459 aa16.45■□□□□ 0.22
PHGDH-230ENST00000641927 OR1F2PQ96R84 312 aa16.45■□□□□ 0.22
PHGDH-230ENST00000641927 BHLHE41Q9C0J9 482 aaPredicted RBP16.45■□□□□ 0.22
PHGDH-230ENST00000641927 CHST8Q9H2A9 424 aa16.45■□□□□ 0.22
PHGDH-230ENST00000641927 AKIRIN1Q9H9L7 192 aaPredicted RBP16.45■□□□□ 0.22
PHGDH-230ENST00000641927 SLC35C2Q9NQQ7 365 aa16.45■□□□□ 0.22
PHGDH-230ENST00000641927 PRTFDC1Q9NRG1 225 aa16.45■□□□□ 0.22
PHGDH-230ENST00000641927 ZNF780BQ9Y6R6 833 aa16.45■□□□□ 0.22
PHGDH-230ENST00000641927 SCN2AQ99250 2005 aa16.44■□□□□ 0.22
PHGDH-230ENST00000641927 A0A1W2PP18 115 aa16.44■□□□□ 0.22
PHGDH-230ENST00000641927 DYTNA2CJ06 578 aa16.44■□□□□ 0.22
PHGDH-230ENST00000641927 BLACEA4D250 179 aa16.44■□□□□ 0.22
PHGDH-230ENST00000641927 OR2W5A6NFC9 320 aa16.44■□□□□ 0.22
PHGDH-230ENST00000641927 PDPK1O15530 556 aa16.44■□□□□ 0.22
PHGDH-230ENST00000641927 IL10P22301 178 aa16.44■□□□□ 0.22
PHGDH-230ENST00000641927 PRDX6P30041 224 aa16.44■□□□□ 0.22
PHGDH-230ENST00000641927 SLC5A2P31639 672 aa16.44■□□□□ 0.22
PHGDH-230ENST00000641927 FEN1P39748 380 aaKnown RBP16.44■□□□□ 0.22
PHGDH-230ENST00000641927 FOLH1Q04609 750 aa16.44■□□□□ 0.22
PHGDH-230ENST00000641927 STX5Q13190 355 aa16.44■□□□□ 0.22
PHGDH-230ENST00000641927 PUM1Q14671 1186 aaKnown RBP eCLIP16.44■□□□□ 0.22
PHGDH-230ENST00000641927 MAPKAPK3Q16644 382 aa16.44■□□□□ 0.22
PHGDH-230ENST00000641927 SHISA6Q6ZSJ9 500 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms