RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 SERPINB1P30740 379 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 CSTF2P33240 577 aaKnown RBP eCLIP9.75□□□□□ -0.85
PHGDH-224ENST00000641711 HPCAL1P37235 193 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 RPL3P39023 403 aaKnown RBP9.75□□□□□ -0.85
PHGDH-224ENST00000641711 TSPAN7P41732 249 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 CDKN2CP42773 168 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 PPM1FP49593 454 aaPredicted RBP9.75□□□□□ -0.85
PHGDH-224ENST00000641711 RAB15P59190 212 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 PHEXP78562 749 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 ABATP80404 500 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 CFHR1Q03591 330 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 DDX39BQ13838 428 aaKnown RBP9.75□□□□□ -0.85
PHGDH-224ENST00000641711 RTP5Q14D33 572 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 CATSPEREQ5SY80 951 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 ANXA8L1Q5VT79 327 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 PRAMEF13Q5VWM6 474 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 OR4F3Q6IEY1 312 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 ERICH5Q6P6B1 374 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 SPESP1Q6UW49 350 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 DNAJC14Q6Y2X3 702 aaPredicted RBP9.75□□□□□ -0.85
PHGDH-224ENST00000641711 FAM129CQ86XR2 697 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 EID3Q8N140 333 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 C1orf52Q8N6N3 182 aaKnown RBP9.75□□□□□ -0.85
PHGDH-224ENST00000641711 OR4E2Q8NGC2 313 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 KLHL6Q8WZ60 621 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 FIG4Q92562 907 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 NXPE2Q96DL1 559 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 FAM120BQ96EK7 910 aaKnown RBP9.75□□□□□ -0.85
PHGDH-224ENST00000641711 SLC41A2Q96JW4 573 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 CCDC74BQ96LY2 380 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 CNBD2Q96M20 576 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 RNF145Q96MT1 663 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 PRPF18Q99633 342 aaKnown RBP9.75□□□□□ -0.85
PHGDH-224ENST00000641711 CENPKQ9BS16 269 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 PITHD1Q9GZP4 211 aaPredicted RBP9.75□□□□□ -0.85
PHGDH-224ENST00000641711 RHBGQ9H310 441 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 PIF1Q9H611 641 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 NT5DC2Q9H857 520 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 PELI2Q9HAT8 420 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 NTN4Q9HB63 628 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 DCAF13Q9NV06 445 aaKnown RBP9.75□□□□□ -0.85
PHGDH-224ENST00000641711 ACTR10Q9NZ32 417 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 NDUFA13Q9P0J0 144 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 CIDEBQ9UHD4 219 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 ADGRE2Q9UHX3 823 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 ATXN7L1Q9ULK2 861 aaPredicted RBP9.75□□□□□ -0.85
PHGDH-224ENST00000641711 OAZ3Q9UMX2 235 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 SH2B3Q9UQQ2 575 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 AP1M2Q9Y6Q5 423 aa9.75□□□□□ -0.85
PHGDH-224ENST00000641711 MDC1Q14676 2089 aaKnown RBP9.75□□□□□ -0.85
PHGDH-224ENST00000641711 ACACBO00763 2458 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 PRAMEF33A0A0G2JMD5 474 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 GSAPA4D1B5 854 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 FAM149AA5PLN7 773 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 GABRR3A8MPY1 467 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 CLIC1O00299 241 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 BTN3A3O00478 584 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 RNASET2O00584 256 aaKnown RBP9.74□□□□□ -0.85
PHGDH-224ENST00000641711 HYAL3O43820 417 aaPredicted RBP9.74□□□□□ -0.85
PHGDH-224ENST00000641711 PCDH7O60245 1069 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 SEMA3DO95025 777 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 ABCB1P08183 1280 aaPredicted RBP9.74□□□□□ -0.85
PHGDH-224ENST00000641711 PABPC4LP0CB38 370 aaKnown RBP9.74□□□□□ -0.85
PHGDH-224ENST00000641711 LAMP1P11279 417 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 POLR2CP19387 275 aaPredicted RBP9.74□□□□□ -0.85
PHGDH-224ENST00000641711 PPIBP23284 216 aaKnown RBP9.74□□□□□ -0.85
PHGDH-224ENST00000641711 MYF6P23409 242 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 CXCR2P25025 360 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 LSSP48449 732 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 GFERP55789 205 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 FOXC1Q12948 553 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 APOFQ13790 326 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 PDE7AQ13946 482 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 ADRM1Q16186 407 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 LIN52Q52LA3 116 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 PHF19Q5T6S3 580 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 CPTPQ5TA50 214 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 NKAIN2Q5VXU1 208 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 CPZQ66K79 652 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 ADNP2Q6IQ32 1131 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 ZNF574Q6ZN55 896 aaPredicted RBP9.74□□□□□ -0.85
PHGDH-224ENST00000641711 USP53Q70EK8 1073 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 ZNF551Q7Z340 670 aaPredicted RBP9.74□□□□□ -0.85
PHGDH-224ENST00000641711 R3HCC1LQ7Z5L2 792 aaKnown RBP9.74□□□□□ -0.85
PHGDH-224ENST00000641711 ANKRD46Q86W74 232 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 BPHLQ86WA6 291 aaPredicted RBP9.74□□□□□ -0.85
PHGDH-224ENST00000641711 KRT78Q8N1N4 520 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 METTL4Q8N3J2 472 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 LMNTD1Q8N9Z9 388 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 LINC01555Q8NAE3 123 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 VPS37AQ8NEZ2 397 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 ABHD11Q8NFV4 315 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 OR7A2PQ8NGA2 310 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 OR8K5Q8NH50 307 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 GOT1L1Q8NHS2 421 aaPredicted RBP9.74□□□□□ -0.85
PHGDH-224ENST00000641711 FAM162AQ96A26 154 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 TBC1D20Q96BZ9 403 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 MTERF3Q96E29 417 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 TGM7Q96PF1 710 aa9.74□□□□□ -0.85
PHGDH-224ENST00000641711 TEFMQ96QE5 360 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms