RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 ZNF483Q8TF39 744 aaPredicted RBP16.51■□□□□ 0.23
PTPN11-207ENST00000639857 TANKQ92844 425 aa16.51■□□□□ 0.23
PTPN11-207ENST00000639857 NCLNQ969V3 563 aa16.51■□□□□ 0.23
PTPN11-207ENST00000639857 ERVK-6Q9BXR3 956 aa16.51■□□□□ 0.23
PTPN11-207ENST00000639857 ZNF717Q9BY31 904 aaPredicted RBP16.51■□□□□ 0.23
PTPN11-207ENST00000639857 RYDENQ9NUL5 291 aaKnown RBP16.51■□□□□ 0.23
PTPN11-207ENST00000639857 A0A0A6YYD5 115 aa16.5■□□□□ 0.23
PTPN11-207ENST00000639857 ASPDHA6ND91 283 aa16.5■□□□□ 0.23
PTPN11-207ENST00000639857 WIPF3A6NGB9 483 aa16.5■□□□□ 0.23
PTPN11-207ENST00000639857 SAP18O00422 153 aaKnown RBP16.5■□□□□ 0.23
PTPN11-207ENST00000639857 ZFAND5O76080 213 aa16.5■□□□□ 0.23
PTPN11-207ENST00000639857 COX7A2P14406 83 aa16.5■□□□□ 0.23
PTPN11-207ENST00000639857 BSGP35613 385 aa16.5■□□□□ 0.23
PTPN11-207ENST00000639857 IFT88Q13099 833 aa16.5■□□□□ 0.23
PTPN11-207ENST00000639857 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.5■□□□□ 0.23
PTPN11-207ENST00000639857 MRM1Q6IN84 353 aaKnown RBP16.5■□□□□ 0.23
PTPN11-207ENST00000639857 GPALPP1Q8IXQ4 340 aa16.5■□□□□ 0.23
PTPN11-207ENST00000639857 LRRN4CLQ8ND94 238 aa16.5■□□□□ 0.23
PTPN11-207ENST00000639857 ANKRD9Q96BM1 317 aaPredicted RBP16.5■□□□□ 0.23
PTPN11-207ENST00000639857 NSUN5Q96P11 429 aaKnown RBP16.5■□□□□ 0.23
PTPN11-207ENST00000639857 CDK15Q96Q40 435 aa16.5■□□□□ 0.23
PTPN11-207ENST00000639857 PELOQ9BRX2 385 aaKnown RBP16.5■□□□□ 0.23
PTPN11-207ENST00000639857 RPF2Q9H7B2 306 aaKnown RBP16.5■□□□□ 0.23
PTPN11-207ENST00000639857 ZNF223Q9UK11 482 aaPredicted RBP16.5■□□□□ 0.23
PTPN11-207ENST00000639857 ADAM29Q9UKF5 820 aa16.5■□□□□ 0.23
PTPN11-207ENST00000639857 FBXW2Q9UKT8 454 aa16.5■□□□□ 0.23
PTPN11-207ENST00000639857 ICE1Q9Y2F5 2266 aa16.5■□□□□ 0.23
PTPN11-207ENST00000639857 DOPEY1Q5JWR5 2465 aa16.5■□□□□ 0.23
PTPN11-207ENST00000639857 NME2P1O60361 137 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 LDB3O75112 727 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 SH3BGRLO75368 114 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 SLC25A12O75746 678 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 SP1P08047 785 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 GP1BBP13224 206 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 NME2P22392 152 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 STT3AP46977 705 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 PLIN5Q00G26 463 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 RASA2Q15283 850 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 C4orf17Q53FE4 359 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 TEX35Q5T0J7 233 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 TTC19Q6DKK2 380 aaPredicted RBP16.49■□□□□ 0.23
PTPN11-207ENST00000639857 SPINK14Q6IE38 97 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 SLC25A25Q6KCM7 469 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 CYP20A1Q6UW02 462 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 MILR1Q7Z6M3 343 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 SLC22A9Q8IVM8 553 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 RNF175Q8N4F7 328 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 OR4F6Q8NGB9 312 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 MZB1Q8WU39 189 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 PTPMT1Q8WUK0 201 aaPredicted RBP16.49■□□□□ 0.23
PTPN11-207ENST00000639857 TMEM125Q96AQ2 219 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 SORBS1Q9BX66 1292 aaKnown RBP16.49■□□□□ 0.23
PTPN11-207ENST00000639857 WDR41Q9HAD4 459 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 BRF2Q9HAW0 419 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 SEMA4BQ9NPR2 832 aaPredicted RBP16.49■□□□□ 0.23
PTPN11-207ENST00000639857 ANKRD10Q9NXR5 420 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 AHSPQ9NZD4 102 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 TMEM216Q9P0N5 145 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 TRPS1Q9UHF7 1281 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 ERRFI1Q9UJM3 462 aaPredicted RBP16.49■□□□□ 0.23
PTPN11-207ENST00000639857 SNX6Q9UNH7 406 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 STK38LQ9Y2H1 464 aa16.49■□□□□ 0.23
PTPN11-207ENST00000639857 YARS2Q9Y2Z4 477 aaKnown RBP16.49■□□□□ 0.23
PTPN11-207ENST00000639857 C17orf105B2RV13 164 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 PROM1O43490 865 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 DYRK3O43781 588 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 FGF17O60258 216 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 ITGA10O75578 1167 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 ETHE1O95571 254 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 LDLRP01130 860 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 STSP08842 583 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 NR2F6P10588 404 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 ATP5F1P24539 256 aaPredicted RBP16.48■□□□□ 0.23
PTPN11-207ENST00000639857 HNRNPH2P55795 449 aaKnown RBP16.48■□□□□ 0.23
PTPN11-207ENST00000639857 PER3P56645 1201 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 NAA20P61599 178 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 HSDL2Q6YN16 418 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 PAGE2Q7Z2X7 111 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 TDRPQ86YL5 185 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 GSPT2Q8IYD1 628 aaKnown RBP16.48■□□□□ 0.23
PTPN11-207ENST00000639857 POGLUT1Q8NBL1 392 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 ART5Q96L15 291 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 FRMD6Q96NE9 622 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 ELOVL6Q9H5J4 265 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 MYOTQ9UBF9 498 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 COPS7AQ9UBW8 275 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 DCDC2Q9UHG0 476 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 KLF13Q9Y2Y9 288 aaPredicted RBP16.48■□□□□ 0.23
PTPN11-207ENST00000639857 ATG4BQ9Y4P1 393 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 ASB4Q9Y574 426 aa16.48■□□□□ 0.23
PTPN11-207ENST00000639857 DIDO1Q9BTC0 2240 aaKnown RBP16.47■□□□□ 0.23
PTPN11-207ENST00000639857 A0A1B0GUH1 482 aa16.47■□□□□ 0.23
PTPN11-207ENST00000639857 GLRA3O75311 464 aa16.47■□□□□ 0.23
PTPN11-207ENST00000639857 EEDO75530 441 aaKnown RBP16.47■□□□□ 0.23
PTPN11-207ENST00000639857 FAM58BPP0C7Q3 252 aa16.47■□□□□ 0.23
PTPN11-207ENST00000639857 SSR4P51571 173 aa16.47■□□□□ 0.23
PTPN11-207ENST00000639857 NEK2P51955 445 aa16.47■□□□□ 0.23
PTPN11-207ENST00000639857 FOLH1Q04609 750 aa16.47■□□□□ 0.23
PTPN11-207ENST00000639857 CLCQ05315 142 aa16.47■□□□□ 0.23
PTPN11-207ENST00000639857 KRTCAP3Q53RY4 240 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms