RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 GMPRP36959 345 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 PLGLB1Q02325 96 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 DLG1Q12959 904 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 AP5B1Q2VPB7 878 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 MEX3BQ6ZN04 569 aaKnown RBP17.11■□□□□ 0.33
CLN6-220ENST00000637450 RTL4Q6ZR62 310 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 CHSY3Q70JA7 882 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 CTAGE3PQ8IX95 158 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 C7orf57Q8NEG2 295 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 SPATA4Q8NEY3 305 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 OR5L2Q8NGL0 311 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 LILRB4Q8NHJ6 448 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 SLC2A12Q8TD20 617 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 EXT2Q93063 718 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 SCYL1Q96KG9 808 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 SGCZQ96LD1 299 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 TTTY12Q9BZ98 90 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 NUDT4Q9NZJ9 180 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 SPACA6W5XKT8 324 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 A0A0G2JMM0 328 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 A0A1W2PPB8 328 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 A0A1W2PRS3 328 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 KIR3DP1A8MWS1 328 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 ACOT7O00154 380 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 ZNF354AO60765 605 aaPredicted RBP17.1■□□□□ 0.33
CLN6-220ENST00000637450 SH3BGRLO75368 114 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 FAM155BO75949 473 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 ETHE1O95571 254 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 TGFB1P01137 390 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 SLC35E2BP0CK96 405 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 SERPINB1P30740 379 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 CHRNB4P30926 498 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 ID2Q02363 134 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 KBTBD12Q3ZCT8 623 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 GXYLT1Q4G148 440 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 NDUFAF5Q5TEU4 345 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 MED27Q6P2C8 311 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 SLC22A16Q86VW1 577 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 RPRMLQ8N4K4 120 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 GOLM1Q8NBJ4 401 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 OR7G3Q8NG95 312 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 ZNF721Q8TF20 911 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 UBTD2Q8WUN7 234 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 CHTF18Q8WVB6 975 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 RND1Q92730 232 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 CMTM7Q96FZ5 175 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 ATOH8Q96SQ7 321 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 FAM173AQ9BQD7 235 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 PHACTR1Q9C0D0 580 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 NMRAL1Q9HBL8 299 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 PYCARDQ9ULZ3 195 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 RNF6Q9Y252 685 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 F8P00451 2351 aa17.1■□□□□ 0.33
CLN6-220ENST00000637450 NPIPA2E9PIF3 369 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 NPIPA3F8WFD2 350 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 G3V3Y1 287 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 K7EPI3 171 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 KERAO60938 352 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 IGHG3P01860 377 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 PCNAP12004 261 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 IGFBP2P18065 325 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 CPN2P22792 545 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 CRABP2P29373 138 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 IGLV3-21P80748 117 aaPredicted RBP17.09■□□□□ 0.33
CLN6-220ENST00000637450 TLE4Q04727 773 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 PMPCAQ10713 525 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 MPEG1Q2M385 716 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 PIGGQ5H8A4 983 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 DEPDC1Q5TB30 811 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 KHDRBS2Q5VWX1 349 aaKnown RBP17.09■□□□□ 0.33
CLN6-220ENST00000637450 OR4C11Q6IEV9 310 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 OPN5Q6U736 354 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 GK5Q6ZS86 529 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 RAPH1Q70E73 1250 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 CMC1Q7Z7K0 106 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 PPM1NQ8N819 430 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 SENP5Q96HI0 755 aaPredicted RBP17.09■□□□□ 0.33
CLN6-220ENST00000637450 IL1RL2Q9HB29 575 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 MCCC2Q9HCC0 563 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 IGSF5Q9NSI5 407 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 OPTCQ9UBM4 332 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 ADGRE2Q9UHX3 823 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 ITGB1BP2Q9UKP3 347 aa17.09■□□□□ 0.33
CLN6-220ENST00000637450 A0A1B0GVC2 190 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 SUPT3HB4E1H0 165 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 UBXN8O00124 270 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 SAP18O00422 153 aaKnown RBP17.08■□□□□ 0.32
CLN6-220ENST00000637450 FGF17O60258 216 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 SUPT3HO75486 399 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 TOXO94900 526 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 LTA4HP09960 611 aaKnown RBP17.08■□□□□ 0.32
CLN6-220ENST00000637450 COX7A2P14406 83 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 SSR2P43308 183 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 STT3AP46977 705 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 PLTPP55058 493 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 TFF3Q07654 80 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 SLAMF1Q13291 335 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 BIKQ13323 160 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 HYAL4Q2M3T9 481 aa17.08■□□□□ 0.32
CLN6-220ENST00000637450 GRHL2Q6ISB3 625 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms