RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 OXSR1O95747 527 aaPredicted RBP11.52□□□□□ -0.56
CLN8-212ENST00000637083 DNTTP04053 509 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 BCHEP06276 602 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 EPHA2P29317 976 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 CD6P30203 668 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 PKLRP30613 574 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 NTSP30990 170 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 GDI1P31150 447 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 WASP42768 502 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 TSFMP43897 325 aaKnown RBP11.52□□□□□ -0.56
CLN8-212ENST00000637083 MAP2K4P45985 399 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 LIMS1P48059 325 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 CCT3P49368 545 aaKnown RBP11.52□□□□□ -0.56
CLN8-212ENST00000637083 HSPB3Q12988 150 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 ZNF846Q147U1 533 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 SLC9A5Q14940 896 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 AHSA2Q719I0 299 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 KRT73Q86Y46 540 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 CCDC71Q8IV32 467 aaPredicted RBP11.52□□□□□ -0.56
CLN8-212ENST00000637083 HORMAD2Q8N7B1 307 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 SMYD1Q8NB12 490 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 SLC38A5Q8WUX1 472 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 APH1BQ8WW43 257 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 EXOSC8Q96B26 276 aaKnown RBP11.52□□□□□ -0.56
CLN8-212ENST00000637083 MOAP1Q96BY2 351 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 VMP1Q96GC9 406 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 PLEKHA8Q96JA3 519 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 TEFMQ96QE5 360 aaKnown RBP11.52□□□□□ -0.56
CLN8-212ENST00000637083 ALPK1Q96QP1 1244 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 ITPAQ9BY32 194 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 WDR12Q9GZL7 423 aaKnown RBP11.52□□□□□ -0.56
CLN8-212ENST00000637083 HMG20AQ9NP66 347 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 MRPS30Q9NP92 439 aaKnown RBP11.52□□□□□ -0.56
CLN8-212ENST00000637083 P2RX2Q9UBL9 471 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 PSORS1C1Q9UIG5 152 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 SLC17A4Q9Y2C5 497 aa11.52□□□□□ -0.56
CLN8-212ENST00000637083 SH3D21A4FU49 640 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 SERPIND1P05546 499 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 TFPTP0C1Z6 253 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 TNFRSF1BP20333 461 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 PSMB5P28074 263 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 GPC1P35052 558 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 AHRP35869 848 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 PBX2P40425 430 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 IDH2P48735 452 aaKnown RBP11.52□□□□□ -0.57
CLN8-212ENST00000637083 BMXP51813 675 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 SPCS2Q15005 226 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 TBCEQ15813 527 aaPredicted RBP11.52□□□□□ -0.57
CLN8-212ENST00000637083 CACUL1Q86Y37 369 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 LINC01555Q8NAE3 123 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 OR2A1Q8NGT9 310 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 C9orf43Q8TAL5 461 aaPredicted RBP11.52□□□□□ -0.57
CLN8-212ENST00000637083 UTP15Q8TED0 518 aaKnown RBP11.52□□□□□ -0.57
CLN8-212ENST00000637083 TANKQ92844 425 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 CHFRQ96EP1 664 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 CRELD1Q96HD1 420 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 TMEM19Q96HH6 336 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 SLC35G5Q96KT7 338 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 SIGLEC11Q96RL6 698 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 TRMT61BQ9BVS5 477 aaKnown RBP11.52□□□□□ -0.57
CLN8-212ENST00000637083 SLC17A9Q9BYT1 436 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 PLA2G2FQ9BZM2 168 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 BTBD1Q9H0C5 482 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 IGFLR1Q9H665 355 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 ANKHQ9HCJ1 492 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 SEMA3GQ9NS98 782 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 FBXL12Q9NXK8 326 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 GALNT8Q9NY28 637 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 KCND3Q9UK17 655 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 DUSP12Q9UNI6 340 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 ZFR2Q9UPR6 939 aaKnown RBP11.52□□□□□ -0.57
CLN8-212ENST00000637083 MGAT4BQ9UQ53 548 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 COLEC10Q9Y6Z7 277 aa11.52□□□□□ -0.57
CLN8-212ENST00000637083 A0A0A6YYD5 115 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 OR2A25A4D2G3 310 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 PDZK1P1A8MUH7 402 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 PLRG1O43660 514 aaKnown RBP11.51□□□□□ -0.57
CLN8-212ENST00000637083 CBFA2T3O75081 653 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 MFN2O95140 757 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 ADAP00813 363 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 VIPP01282 170 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 CDK1P06493 297 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 MASP1P48740 699 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 TGM3Q08188 693 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 SFSWAPQ12872 951 aaKnown RBP11.51□□□□□ -0.57
CLN8-212ENST00000637083 AQP6Q13520 282 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 TP53BP2Q13625 1128 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 SMN1Q16637 294 aaKnown RBP11.51□□□□□ -0.57
CLN8-212ENST00000637083 UAP1L1Q3KQV9 507 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 FBXO43Q4G163 708 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 ATAT1Q5SQI0 421 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 LAIR1Q6GTX8 287 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 DUS1LQ6P1R4 473 aaKnown RBP11.51□□□□□ -0.57
CLN8-212ENST00000637083 TNFAIP8L2Q6P589 184 aaPredicted RBP11.51□□□□□ -0.57
CLN8-212ENST00000637083 TMEM184AQ6ZMB5 413 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 Q6ZNX1 250 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 SLCO6A1Q86UG4 719 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 SLC44A2Q8IWA5 706 aaPredicted RBP11.51□□□□□ -0.57
CLN8-212ENST00000637083 MMP21Q8N119 569 aa11.51□□□□□ -0.57
CLN8-212ENST00000637083 DNAJC22Q8N4W6 341 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms