RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 PSD4Q8NDX1 1056 aa16.67■□□□□ 0.26
PNKP-225ENST00000636214 AGAP11Q8TF27 550 aa16.67■□□□□ 0.26
PNKP-225ENST00000636214 ATP6V1E2Q96A05 226 aa16.67■□□□□ 0.26
PNKP-225ENST00000636214 C16orf45Q96MC5 204 aaPredicted RBP16.67■□□□□ 0.26
PNKP-225ENST00000636214 DGAT2Q96PD7 388 aa16.67■□□□□ 0.26
PNKP-225ENST00000636214 LRRC1Q9BTT6 524 aa16.67■□□□□ 0.26
PNKP-225ENST00000636214 TSPYL1Q9H0U9 437 aa16.67■□□□□ 0.26
PNKP-225ENST00000636214 VPS11Q9H270 941 aa16.67■□□□□ 0.26
PNKP-225ENST00000636214 OR51B5Q9H339 312 aa16.67■□□□□ 0.26
PNKP-225ENST00000636214 KCMF1Q9P0J7 381 aa16.67■□□□□ 0.26
PNKP-225ENST00000636214 MYOTQ9UBF9 498 aa16.67■□□□□ 0.26
PNKP-225ENST00000636214 PHF11Q9UIL8 331 aa16.67■□□□□ 0.26
PNKP-225ENST00000636214 ZNF223Q9UK11 482 aaPredicted RBP16.67■□□□□ 0.26
PNKP-225ENST00000636214 MEMO1Q9Y316 297 aa16.67■□□□□ 0.26
PNKP-225ENST00000636214 TNPO3Q9Y5L0 923 aaKnown RBP16.67■□□□□ 0.26
PNKP-225ENST00000636214 WWP2O00308 870 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 WISP2O76076 250 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 KLHL2O95198 593 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 TPOP07202 933 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 INHBAP08476 426 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 COX6B1P14854 86 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 BUD31P41223 144 aaPredicted RBP16.66■□□□□ 0.26
PNKP-225ENST00000636214 PIK3CBP42338 1070 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 GPR143P51810 404 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 PLIN5Q00G26 463 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 ID2Q02363 134 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 PCDH1Q08174 1060 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 SLAMF1Q13291 335 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 BIKQ13323 160 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 DEPDC1Q5TB30 811 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 PAOXQ6QHF9 649 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 UBE3DQ7Z6J8 389 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 ZNF227Q86WZ6 799 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 LURAP1LQ8IV03 231 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 CENPLQ8N0S6 344 aaPredicted RBP16.66■□□□□ 0.26
PNKP-225ENST00000636214 OR8K3Q8NH51 312 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 HUS1BQ8NHY5 278 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 SLC2A12Q8TD20 617 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 PTPMT1Q8WUK0 201 aaPredicted RBP16.66■□□□□ 0.26
PNKP-225ENST00000636214 SREK1Q8WXA9 508 aaKnown RBP16.66■□□□□ 0.26
PNKP-225ENST00000636214 ART5Q96L15 291 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 MTERF1Q99551 399 aaKnown RBP16.66■□□□□ 0.26
PNKP-225ENST00000636214 ACSS3Q9H6R3 686 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 LIN28AQ9H9Z2 209 aaKnown RBP16.66■□□□□ 0.26
PNKP-225ENST00000636214 CLDN16Q9Y5I7 305 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 DNAJC13O75165 2243 aa16.66■□□□□ 0.26
PNKP-225ENST00000636214 NCOA6Q14686 2063 aaPredicted RBP16.65■□□□□ 0.26
PNKP-225ENST00000636214 HS6ST1O60243 411 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 PRKNO60260 465 aaPredicted RBP16.65■□□□□ 0.26
PNKP-225ENST00000636214 UGDHO60701 494 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 SCELO95171 688 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 PTGER1P34995 402 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 PTGS2P35354 604 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 ADORA2A-AS1P86434 159 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 GTF2H2Q13888 395 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 ZNF630Q2M218 657 aaPredicted RBP16.65■□□□□ 0.26
PNKP-225ENST00000636214 RNFT1Q5M7Z0 435 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 GTF2H2CQ6P1K8 395 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 MDGA2Q7Z553 956 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 TICAM1Q8IUC6 712 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 ZFP62Q8NB50 900 aaPredicted RBP16.65■□□□□ 0.26
PNKP-225ENST00000636214 MNS1Q8NEH6 495 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 ZNF592Q92610 1267 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 RBM18Q96H35 190 aaKnown RBP16.65■□□□□ 0.26
PNKP-225ENST00000636214 SCYL1Q96KG9 808 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 RASL10BQ96S79 203 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 RPF2Q9H7B2 306 aaKnown RBP16.65■□□□□ 0.26
PNKP-225ENST00000636214 WDR41Q9HAD4 459 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 DMRT3Q9NQL9 472 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 ZDHHC18Q9NUE0 388 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.65■□□□□ 0.26
PNKP-225ENST00000636214 LYARQ9NX58 379 aaKnown RBP16.65■□□□□ 0.26
PNKP-225ENST00000636214 NINJ2Q9NZG7 142 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 ZNF407Q9C0G0 2248 aa16.65■□□□□ 0.26
PNKP-225ENST00000636214 A0A1B0GTH9 108 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 E9PLN8 166 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 CLDN14O95500 239 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 RBP1P09455 135 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 MTHFD2P13995 350 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 PTX3P26022 381 aaPredicted RBP16.64■□□□□ 0.25
PNKP-225ENST00000636214 SOX3P41225 446 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 HK2P52789 917 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 ARFIP1P53367 373 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 RNF4P78317 190 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 PCBP2Q15366 365 aaKnown RBP eCLIP16.64■□□□□ 0.25
PNKP-225ENST00000636214 CPSF6Q16630 551 aaKnown RBP eCLIP16.64■□□□□ 0.25
PNKP-225ENST00000636214 METTL2BQ6P1Q9 378 aaKnown RBP16.64■□□□□ 0.25
PNKP-225ENST00000636214 ARHGAP11AQ6P4F7 1023 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 OPN5Q6U736 354 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 CYP20A1Q6UW02 462 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 C16orf47Q6ZP98 133 aaPredicted RBP16.64■□□□□ 0.25
PNKP-225ENST00000636214 RTL4Q6ZR62 310 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 GK5Q6ZS86 529 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 GOLGA7Q7Z5G4 137 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 GPR180Q86V85 440 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 CD163Q86VB7 1156 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 MCEMP1Q8IX19 187 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 SRRM1Q8IYB3 904 aaKnown RBP16.64■□□□□ 0.25
PNKP-225ENST00000636214 TANKQ92844 425 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 VKORC1Q9BQB6 163 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms