RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 EPHA6Q9UF33 1036 aa15.46■□□□□ 0.07
CLN5-208ENST00000636183 AP1M2Q9Y6Q5 423 aa15.46■□□□□ 0.07
CLN5-208ENST00000636183 GPIP06744 558 aa15.46■□□□□ 0.06
CLN5-208ENST00000636183 GABRA2P47869 451 aa15.46■□□□□ 0.06
CLN5-208ENST00000636183 CLDN2P57739 230 aa15.46■□□□□ 0.06
CLN5-208ENST00000636183 FBXO43Q4G163 708 aa15.46■□□□□ 0.06
CLN5-208ENST00000636183 KDELC1Q6UW63 502 aa15.46■□□□□ 0.06
CLN5-208ENST00000636183 SLC5A8Q8N695 610 aa15.46■□□□□ 0.06
CLN5-208ENST00000636183 TRIM36Q9NQ86 728 aa15.46■□□□□ 0.06
CLN5-208ENST00000636183 HEBP1Q9NRV9 189 aa15.46■□□□□ 0.06
CLN5-208ENST00000636183 KCNN3Q9UGI6 736 aa15.46■□□□□ 0.06
CLN5-208ENST00000636183 SMIM30A4D0T7 59 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 TLX2O43763 284 aaPredicted RBP15.45■□□□□ 0.06
CLN5-208ENST00000636183 SSX5O60225 188 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 PSPHP78330 225 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 GALNT12Q8IXK2 581 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 AKAP1Q92667 903 aaKnown RBP eCLIP15.45■□□□□ 0.06
CLN5-208ENST00000636183 OR5B2Q96R09 309 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 HERPUD2Q9BSE4 406 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 OXSMQ9NWU1 459 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 UNCXA6NJT0 531 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 ZNF850A8MQ14 1090 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 PRAMEF11O60813 436 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 RAP2AP10114 183 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 PIK3CBP42338 1070 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 MLLT6P55198 1093 aaPredicted RBP15.45■□□□□ 0.06
CLN5-208ENST00000636183 FOXC1Q12948 553 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 FIGLAQ6QHK4 219 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 TRAM1L1Q8N609 369 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 CCDC59Q9P031 241 aaKnown RBP15.45■□□□□ 0.06
CLN5-208ENST00000636183 WRAP73Q9P2S5 460 aaPredicted RBP15.45■□□□□ 0.06
CLN5-208ENST00000636183 SH2B3Q9UQQ2 575 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 SFTPBP07988 381 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 GRIA1P42261 906 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 NCEH1Q6PIU2 408 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 TMEM168Q9H0V1 697 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 RPF2Q9H7B2 306 aaKnown RBP15.45■□□□□ 0.06
CLN5-208ENST00000636183 YARS2Q9Y2Z4 477 aaKnown RBP15.45■□□□□ 0.06
CLN5-208ENST00000636183 CICQ96RK0 1608 aaPredicted RBP15.45■□□□□ 0.06
CLN5-208ENST00000636183 MUCL1Q96DR8 90 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 C16orf58Q96GQ5 468 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 CENPNQ96H22 339 aaPredicted RBP15.45■□□□□ 0.06
CLN5-208ENST00000636183 CDCA3Q99618 268 aaPredicted RBP15.45■□□□□ 0.06
CLN5-208ENST00000636183 ZNF358Q9NW07 568 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 FESP07332 822 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 LEPRP48357 1165 aaKnown RBP15.45■□□□□ 0.06
CLN5-208ENST00000636183 KIAA0319Q5VV43 1072 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 ADGRD1Q6QNK2 874 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 GALNT6Q8NCL4 622 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 AKTIPQ9H8T0 292 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 PDE10AQ9Y233 779 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 RFXAPO00287 272 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 PRKCAP17252 672 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 POU3F2P20265 443 aaPredicted RBP15.45■□□□□ 0.06
CLN5-208ENST00000636183 ZFP69Q49AA0 526 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 SWT1Q5T5J6 900 aaKnown RBP15.45■□□□□ 0.06
CLN5-208ENST00000636183 TMEM25Q86YD3 366 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 TSGA13Q96PP4 275 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 ZNF576Q9H609 170 aa15.45■□□□□ 0.06
CLN5-208ENST00000636183 BMP1P13497 986 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 KCNE1P15382 129 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 CEBPBP17676 345 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 CHRNB2P17787 502 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 RBM34P42696 430 aaKnown RBP15.44■□□□□ 0.06
CLN5-208ENST00000636183 NPTX1Q15818 432 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 FBXL8Q96CD0 374 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 CD244Q9BZW8 370 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 PLEKHA3Q9HB20 300 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 KIF1AQ12756 1690 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 M0R036 132 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 CCNKO75909 580 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 SERINC3Q13530 473 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 RALGPS1Q5JS13 557 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 RPS27LQ71UM5 84 aaKnown RBP15.44■□□□□ 0.06
CLN5-208ENST00000636183 VTCN1Q7Z7D3 282 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 ARHGAP12Q8IWW6 846 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 RBM15BQ8NDT2 890 aaKnown RBP15.44■□□□□ 0.06
CLN5-208ENST00000636183 GNPDA2Q8TDQ7 276 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 TWNKQ96RR1 684 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 HCFC1R1Q9NWW0 138 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 HHLA1C9JL84 531 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 ABLIM1O14639 778 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 ANXA8P13928 327 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 ARSFP54793 590 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 WDR53Q7Z5U6 358 aaPredicted RBP15.44■□□□□ 0.06
CLN5-208ENST00000636183 HES7Q9BYE0 225 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 ZNF180Q9UJW8 692 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 MCTS1Q9ULC4 181 aaKnown RBP15.44■□□□□ 0.06
CLN5-208ENST00000636183 TCN2P20062 427 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 RPL5P46777 297 aaKnown RBP15.44■□□□□ 0.06
CLN5-208ENST00000636183 PPP1R8Q12972 351 aaKnown RBP15.44■□□□□ 0.06
CLN5-208ENST00000636183 NPAS3Q8IXF0 933 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 BBS10Q8TAM1 723 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 NKD2Q969F2 451 aaPredicted RBP15.44■□□□□ 0.06
CLN5-208ENST00000636183 ANKRA2Q9H9E1 313 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 NGBQ9NPG2 151 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 A0A1B0GVC2 190 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 TMX2-CTNND1H3BSU7 103 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 CD46P15529 392 aa15.44■□□□□ 0.06
CLN5-208ENST00000636183 MAGEA11P43364 429 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms