RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 SAGE2PA6NJ88 616 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 TMEM114B3SHH9 223 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 RSL1D1O76021 490 aaKnown RBP13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 GBAP04062 536 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 SERPINE1P05121 402 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 CHRNGP07510 517 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 CHN1P15882 459 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 GRK2P25098 689 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 TRA2BP62995 288 aaKnown RBP13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 IGLV3-21P80748 117 aaPredicted RBP13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 ACSM2AQ08AH3 577 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 STX4Q12846 297 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 BIKQ13323 160 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 IMPG1Q17R60 797 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 BTBD16Q32M84 506 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 AGAP7PQ5VUJ5 663 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 ACSM2BQ68CK6 577 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 C18orf63Q68DL7 685 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 CLEC6AQ6EIG7 209 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 GALNT18Q6P9A2 607 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 CLNKQ7Z7G1 428 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 C1orf52Q8N6N3 182 aaKnown RBP13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 METTL2AQ96IZ6 378 aaKnown RBP13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 AGAP4Q96P64 663 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 MMP25Q9NPA2 562 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 ADAP2Q9NPF8 381 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 SIRT5Q9NXA8 310 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 MCM8Q9UJA3 840 aa13.82□□□□□ -0.2
CDC42BPB-209ENST00000634889 SCN2AQ99250 2005 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 A0A1W2PR48 441 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 NPIPB8E9PQR5 432 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 TGFBR3LH3BV60 316 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 AIFM1O95831 613 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 PDGFAP04085 211 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 NEFHP12036 1026 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 GSTM5P46439 218 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 SLC26A5P58743 744 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 HMGCS1Q01581 520 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 RAPSNQ13702 412 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 ELAVL1Q15717 326 aaKnown RBP13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 CHI3L2Q15782 390 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 CRB2Q5IJ48 1285 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 HHATQ5VTY9 493 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 OR52E8Q6IFG1 317 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 IGFL3Q6UXB1 125 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 CLYBLQ8N0X4 340 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 TM9SF4Q92544 642 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 ANKRD9Q96BM1 317 aaPredicted RBP13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 C11orf24Q96F05 449 aaPredicted RBP13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 SH3GL2Q99962 352 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 ALOXE3Q9BYJ1 711 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 ZNF71Q9NQZ8 489 aaPredicted RBP13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 NKIRAS1Q9NYS0 192 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 VTI1BQ9UEU0 232 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 PPIEQ9UNP9 301 aaKnown RBP13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 TRAF6Q9Y4K3 522 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 DNAJC15Q9Y5T4 150 aa13.81□□□□□ -0.2
CDC42BPB-209ENST00000634889 WDR91A4D1P6 747 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 K7EM74 188 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 SLC28A1O00337 649 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 RGS14O43566 566 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 PCDH7O60245 1069 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 FGF17O60258 216 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 DPM1O60762 260 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 LDB3O75112 727 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 C1QL1O75973 258 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 ITGAMP11215 1152 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 PRPH2P23942 346 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 SERPINB3P29508 390 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 TIA1P31483 386 aaKnown RBP eCLIP13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 ARRB2P32121 409 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 FOLH1Q04609 750 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 NFATC3Q12968 1075 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 SPDYAQ5MJ70 313 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 SH2D4BQ5SQS7 431 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 NDUFAF5Q5TEU4 345 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 SCIMPQ6UWF3 145 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 IGFL2Q6UWQ7 119 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 KIRREL3Q8IZU9 778 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 GOLGA6L1Q8N7Z2 621 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 ANKRD42Q8N9B4 389 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 FAM76AQ8TAV0 307 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 DNAJB14Q8TBM8 379 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 BRIX1Q8TDN6 353 aaKnown RBP13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 PSMF1Q92530 271 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 APIPQ96GX9 242 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 ATP6V1G3Q96LB4 118 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 CCT7Q99832 543 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 PELOQ9BRX2 385 aaKnown RBP13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 FAIM2Q9BWQ8 316 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 PNO1Q9NRX1 252 aaKnown RBP13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 TEX10Q9NXF1 929 aaPredicted RBP13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 CCL27Q9Y4X3 112 aa13.8□□□□□ -0.2
CDC42BPB-209ENST00000634889 C1orf226A1L170 272 aa13.79□□□□□ -0.2
CDC42BPB-209ENST00000634889 PRKRAO75569 313 aaKnown RBP13.79□□□□□ -0.2
CDC42BPB-209ENST00000634889 MYO1DO94832 1006 aa13.79□□□□□ -0.2
CDC42BPB-209ENST00000634889 HSPA4LO95757 839 aa13.79□□□□□ -0.2
CDC42BPB-209ENST00000634889 GPR75O95800 540 aa13.79□□□□□ -0.2
CDC42BPB-209ENST00000634889 IFNA16P05015 189 aa13.79□□□□□ -0.2
CDC42BPB-209ENST00000634889 CELA2AP08217 269 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms