RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 CEACAM8P31997 349 aaPredicted RBP18.55■□□□□ 0.56
TARDBP-228ENST00000629725 PGGT1BP53609 377 aa18.55■□□□□ 0.56
TARDBP-228ENST00000629725 PLA2G16P53816 162 aa18.55■□□□□ 0.56
TARDBP-228ENST00000629725 LIM2P55344 173 aa18.55■□□□□ 0.56
TARDBP-228ENST00000629725 KCNJ2P63252 427 aa18.55■□□□□ 0.56
TARDBP-228ENST00000629725 NKX6-1P78426 367 aaPredicted RBP18.55■□□□□ 0.56
TARDBP-228ENST00000629725 RCN2Q14257 317 aa18.55■□□□□ 0.56
TARDBP-228ENST00000629725 EFTUD2Q15029 972 aaKnown RBP eCLIP18.55■□□□□ 0.56
TARDBP-228ENST00000629725 MPEG1Q2M385 716 aa18.55■□□□□ 0.56
TARDBP-228ENST00000629725 SBSNQ6UWP8 590 aa18.55■□□□□ 0.56
TARDBP-228ENST00000629725 TMIGD1Q6UXZ0 262 aa18.55■□□□□ 0.56
TARDBP-228ENST00000629725 KIF18BQ86Y91 864 aa18.55■□□□□ 0.56
TARDBP-228ENST00000629725 KRTAP1-3Q8IUG1 177 aa18.55■□□□□ 0.56
TARDBP-228ENST00000629725 LIX1Q8N485 282 aa18.55■□□□□ 0.56
TARDBP-228ENST00000629725 QRFPRQ96P65 431 aa18.55■□□□□ 0.56
TARDBP-228ENST00000629725 ZFP64Q9NPA5 681 aa18.55■□□□□ 0.56
TARDBP-228ENST00000629725 ACKR4Q9NPB9 350 aa18.55■□□□□ 0.56
TARDBP-228ENST00000629725 COPS7AQ9UBW8 275 aa18.55■□□□□ 0.56
TARDBP-228ENST00000629725 BOKQ9UMX3 212 aaPredicted RBP18.55■□□□□ 0.56
TARDBP-228ENST00000629725 DAPP1Q9UN19 280 aa18.55■□□□□ 0.56
TARDBP-228ENST00000629725 AHRRA9YTQ3 701 aa18.54■□□□□ 0.56
TARDBP-228ENST00000629725 H2AFYO75367 372 aaKnown RBP18.54■□□□□ 0.56
TARDBP-228ENST00000629725 EPPINO95925 133 aa18.54■□□□□ 0.56
TARDBP-228ENST00000629725 IL2RAP01589 272 aa18.54■□□□□ 0.56
TARDBP-228ENST00000629725 CCDC175P0C221 793 aa18.54■□□□□ 0.56
TARDBP-228ENST00000629725 TIMP3P35625 211 aa18.54■□□□□ 0.56
TARDBP-228ENST00000629725 TBL3Q12788 808 aaKnown RBP18.54■□□□□ 0.56
TARDBP-228ENST00000629725 ASPHQ12797 758 aa18.54■□□□□ 0.56
TARDBP-228ENST00000629725 CRYMQ14894 314 aa18.54■□□□□ 0.56
TARDBP-228ENST00000629725 ACSF3Q4G176 576 aaPredicted RBP18.54■□□□□ 0.56
TARDBP-228ENST00000629725 PIGGQ5H8A4 983 aa18.54■□□□□ 0.56
TARDBP-228ENST00000629725 SHEQ5VZ18 495 aa18.54■□□□□ 0.56
TARDBP-228ENST00000629725 TRIM40Q6P9F5 258 aa18.54■□□□□ 0.56
TARDBP-228ENST00000629725 POMZP3Q6PJE2 187 aa18.54■□□□□ 0.56
TARDBP-228ENST00000629725 OR2L5Q8NG80 312 aa18.54■□□□□ 0.56
TARDBP-228ENST00000629725 LINC01560Q8TB33 94 aa18.54■□□□□ 0.56
TARDBP-228ENST00000629725 RUNDC3BQ96NL0 473 aa18.54■□□□□ 0.56
TARDBP-228ENST00000629725 SERINC2Q96SA4 455 aa18.54■□□□□ 0.56
TARDBP-228ENST00000629725 REXO4Q9GZR2 422 aaKnown RBP18.54■□□□□ 0.56
TARDBP-228ENST00000629725 SLC6A15Q9H2J7 730 aa18.54■□□□□ 0.56
TARDBP-228ENST00000629725 SH2D2AQ9NP31 389 aa18.54■□□□□ 0.56
TARDBP-228ENST00000629725 BEX4Q9NWD9 120 aaPredicted RBP18.54■□□□□ 0.56
TARDBP-228ENST00000629725 QPCTLQ9NXS2 382 aa18.54■□□□□ 0.56
TARDBP-228ENST00000629725 KIAA1324LA8MWY0 1029 aaPredicted RBP18.53■□□□□ 0.56
TARDBP-228ENST00000629725 GOSR1O95249 250 aa18.53■□□□□ 0.56
TARDBP-228ENST00000629725 C1GALT1C1LP0DN25 315 aa18.53■□□□□ 0.56
TARDBP-228ENST00000629725 GNAZP19086 355 aa18.53■□□□□ 0.56
TARDBP-228ENST00000629725 CD53P19397 219 aa18.53■□□□□ 0.56
TARDBP-228ENST00000629725 CERS1P27544 350 aa18.53■□□□□ 0.56
TARDBP-228ENST00000629725 GSTM2P28161 218 aa18.53■□□□□ 0.56
TARDBP-228ENST00000629725 HPDP32754 393 aaPredicted RBP18.53■□□□□ 0.56
TARDBP-228ENST00000629725 MTTPP55157 894 aa18.53■□□□□ 0.56
TARDBP-228ENST00000629725 WNT3P56703 355 aa18.53■□□□□ 0.56
TARDBP-228ENST00000629725 SERTAD2Q14140 314 aa18.53■□□□□ 0.56
TARDBP-228ENST00000629725 PPP1R3AQ16821 1122 aa18.53■□□□□ 0.56
TARDBP-228ENST00000629725 ZNF791Q3KP31 576 aaPredicted RBP18.53■□□□□ 0.56
TARDBP-228ENST00000629725 PRAMEF20Q5VT98 475 aa18.53■□□□□ 0.56
TARDBP-228ENST00000629725 ADGRD1Q6QNK2 874 aa18.53■□□□□ 0.56
TARDBP-228ENST00000629725 LACC1Q8IV20 430 aa18.53■□□□□ 0.56
TARDBP-228ENST00000629725 LRRC25Q8N386 305 aaPredicted RBP18.53■□□□□ 0.56
TARDBP-228ENST00000629725 PAQR8Q8TEZ7 354 aa18.53■□□□□ 0.56
TARDBP-228ENST00000629725 YIPF4Q9BSR8 244 aa18.53■□□□□ 0.56
TARDBP-228ENST00000629725 COPS7BQ9H9Q2 264 aaPredicted RBP18.53■□□□□ 0.56
TARDBP-228ENST00000629725 IKZF3Q9UKT9 509 aa18.53■□□□□ 0.56
TARDBP-228ENST00000629725 CSPG4Q6UVK1 2322 aa18.52■□□□□ 0.56
TARDBP-228ENST00000629725 CLCA1A8K7I4 914 aa18.52■□□□□ 0.56
TARDBP-228ENST00000629725 KDM4EB2RXH2 506 aaPredicted RBP18.52■□□□□ 0.56
TARDBP-228ENST00000629725 LDB3O75112 727 aa18.52■□□□□ 0.56
TARDBP-228ENST00000629725 CLEC3AO75596 197 aa18.52■□□□□ 0.56
TARDBP-228ENST00000629725 LY6G6DO95868 133 aa18.52■□□□□ 0.56
TARDBP-228ENST00000629725 PGAM1P18669 254 aa18.52■□□□□ 0.56
TARDBP-228ENST00000629725 TRPC1P48995 793 aa18.52■□□□□ 0.56
TARDBP-228ENST00000629725 ZNF136P52737 540 aa18.52■□□□□ 0.56
TARDBP-228ENST00000629725 SORDQ00796 357 aa18.52■□□□□ 0.56
TARDBP-228ENST00000629725 SLBPQ14493 270 aaKnown RBP eCLIP18.52■□□□□ 0.56
TARDBP-228ENST00000629725 ADPRMQ3LIE5 342 aa18.52■□□□□ 0.56
TARDBP-228ENST00000629725 CNTN4Q8IWV2 1026 aa18.52■□□□□ 0.56
TARDBP-228ENST00000629725 NUBPLQ8TB37 319 aa18.52■□□□□ 0.56
TARDBP-228ENST00000629725 SLC22A8Q8TCC7 542 aa18.52■□□□□ 0.56
TARDBP-228ENST00000629725 ZNF721Q8TF20 911 aa18.52■□□□□ 0.56
TARDBP-228ENST00000629725 KIAA1191Q96A73 305 aa18.52■□□□□ 0.56
TARDBP-228ENST00000629725 PDLIM5Q96HC4 596 aaKnown RBP18.52■□□□□ 0.56
TARDBP-228ENST00000629725 JSRP1Q96MG2 331 aaPredicted RBP18.52■□□□□ 0.56
TARDBP-228ENST00000629725 VWA7Q9Y334 891 aa18.52■□□□□ 0.56
TARDBP-228ENST00000629725 KIAA1549Q9HCM3 1950 aa18.51■□□□□ 0.55
TARDBP-228ENST00000629725 RTTNQ86VV8 2226 aa18.51■□□□□ 0.55
TARDBP-228ENST00000629725 ZANQ9Y493 2812 aa18.51■□□□□ 0.55
TARDBP-228ENST00000629725 C15orf38-AP3S2A0A0A6YYH1 394 aa18.51■□□□□ 0.55
TARDBP-228ENST00000629725 ANKDD1BA6NHY2 528 aa18.51■□□□□ 0.55
TARDBP-228ENST00000629725 LRRC3CA6NJW4 275 aa18.51■□□□□ 0.55
TARDBP-228ENST00000629725 ETHE1O95571 254 aa18.51■□□□□ 0.55
TARDBP-228ENST00000629725 HNMTP50135 292 aa18.51■□□□□ 0.55
TARDBP-228ENST00000629725 DUSP8Q13202 625 aa18.51■□□□□ 0.55
TARDBP-228ENST00000629725 TTC27Q6P3X3 843 aa18.51■□□□□ 0.55
TARDBP-228ENST00000629725 ABHD17CQ6PCB6 329 aa18.51■□□□□ 0.55
TARDBP-228ENST00000629725 SLCO4C1Q6ZQN7 724 aa18.51■□□□□ 0.55
TARDBP-228ENST00000629725 KRT78Q8N1N4 520 aa18.51■□□□□ 0.55
TARDBP-228ENST00000629725 NAT8LQ8N9F0 302 aa18.51■□□□□ 0.55
TARDBP-228ENST00000629725 SPACA9Q96E40 222 aaPredicted RBP18.51■□□□□ 0.55
TARDBP-228ENST00000629725 HSPBAP1Q96EW2 488 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms