RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 HNRNPFP52597 415 aaKnown RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 ARFIP1P53367 373 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 PLA2G16P53816 162 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 STXBP1P61764 594 aaKnown RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 RELAQ04206 551 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 RGS1Q08116 209 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 C2orf80Q0P641 193 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 LRRC74AQ0VAA2 488 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 TRAP1Q12931 704 aaKnown RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 BNIP2Q12982 314 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 RCN1Q15293 331 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 NR0B2Q15466 257 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 C14orf28Q4W4Y0 310 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 RUNDC3AQ59EK9 446 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 ARHGAP40Q5TG30 622 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 ANXA8L1Q5VT79 327 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 OR4C11Q6IEV9 310 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 FRMPD2BQ6IN97 320 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 TRIM40Q6P9F5 258 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 ABHD17CQ6PCB6 329 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 KCT2Q8NC54 265 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 HIPK4Q8NE63 616 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 OR2L5Q8NG80 312 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 SLC26A7Q8TE54 656 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 PYDC1Q8WXC3 89 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 MTERF3Q96E29 417 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 THAP11Q96EK4 314 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 SLC46A1Q96NT5 459 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 GBP5Q96PP8 586 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 KCNC2Q96PR1 638 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 SLC38A3Q99624 504 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 SH3GL1Q99961 368 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 C17orf62Q9BQA9 187 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 CPPED1Q9BRF8 314 aaPredicted RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 ALG2Q9H553 416 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 FAM60AQ9NP50 221 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 ASCL3Q9NQ33 180 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 MIEF1Q9NQG6 463 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 TEX10Q9NXF1 929 aaPredicted RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 UNC13CQ8NB66 2214 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 LOC105369274A0A096LPK9 316 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 LY6G6EA0A0G2JKS1 128 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 LOC102723532A0A0G2JNH3 316 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 PRSS51A0A1B0GVH4 220 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 CASC3O15234 703 aaKnown RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 CTSBP07858 339 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 ST6GAL1P15907 406 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 DDX5P17844 614 aaKnown RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 TSFMP43897 325 aaKnown RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 TRPC1P48995 793 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 PPM1FP49593 454 aaPredicted RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 GZMMP51124 257 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 EEFSECP57772 596 aaKnown RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 OR4D2P58180 307 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 AP2B1P63010 937 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 LIPEQ05469 1076 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 TGM3Q08188 693 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 HEPACAMQ14CZ8 416 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 TOR1AIP1Q5JTV8 583 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 C6orf132Q5T0Z8 1188 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 MRM1Q6IN84 353 aaKnown RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 FAM180BQ6P0A1 224 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 AAGABQ6PD74 315 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 RBM44Q6ZP01 1051 aaKnown RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 RNF44Q7L0R7 432 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 ASPGQ86U10 573 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 PTRH1Q86Y79 214 aaKnown RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 OR4N4Q8N0Y3 316 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 SHISA5Q8N114 240 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 BHLHE22Q8NFJ8 381 aaPredicted RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 WDR36Q8NI36 951 aaKnown RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 NRG4Q8WWG1 115 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 NAT6Q93015 286 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 CIDECQ96AQ7 238 aaPredicted RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 PPCDCQ96CD2 204 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 NAF1Q96HR8 494 aaKnown RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 ZNF583Q96ND8 569 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 CCDC115Q96NT0 180 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 TRAPPC9Q96Q05 1148 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 PANX1Q96RD7 426 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 KCTD14Q9BQ13 255 aaPredicted RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 ZFYVE21Q9BQ24 234 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 BHLHE41Q9C0J9 482 aaPredicted RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 SLAMF7Q9NQ25 335 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 AP3M1Q9Y2T2 418 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 U3KQA8 63 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 SETXQ7Z333 2677 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 A0A0J9YVX5 310 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 C1orf226A1L170 272 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 CPED1A4D0V7 1026 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 URADA6NGE7 173 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 WASHC1A8K0Z3 465 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 RHPN2P1A8MT19 583 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 RNASET2O00584 256 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 NVLO15381 856 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 C8BP07358 591 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 SMIM10L1P0DMW3 83 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 CDH3P22223 829 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 ATP5A1P25705 553 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 CAPZBP47756 277 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms