RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 RHBDD2Q6NTF9 364 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 PRMT9Q6P2P2 845 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 SLC2A7Q6PXP3 512 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 RETREG3Q86VR2 466 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 DSELQ8IZU8 1212 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 SHISA5Q8N114 240 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 COL26A1Q96A83 441 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 EXOSC8Q96B26 276 aaKnown RBP16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 CLIP3Q96DZ5 547 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 BHLHE41Q9C0J9 482 aaPredicted RBP16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 EHD3Q9NZN3 535 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 CCDC187A0A096LP49 1063 aa16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 TBX19O60806 448 aa16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 NTRK1P04629 796 aa16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 HBQ1P09105 142 aa16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 MAPK10P53779 464 aa16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 ART3Q13508 389 aa16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 MAPKAPK3Q16644 382 aa16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 PRSS53Q2L4Q9 553 aa16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 COQ5Q5HYK3 327 aa16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 RINLQ6ZS11 566 aa16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 ANKRD46Q86W74 232 aa16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 PCYOX1LQ8NBM8 494 aa16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 FBXO27Q8NI29 283 aa16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 CIDECQ96AQ7 238 aaPredicted RBP16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 ZNF764Q96H86 408 aaPredicted RBP16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 PEX11GQ96HA9 241 aa16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 YIPF2Q9BWQ6 316 aa16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 RPF2Q9H7B2 306 aaKnown RBP16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 RMND5AQ9H871 391 aa16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 ZNF304Q9HCX3 659 aa16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 FAM120CQ9NX05 1096 aaKnown RBP16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 UTS2RQ9UKP6 389 aa16.81■□□□□ 0.28
PTCHD3-202ENST00000622555 WASHC1A8K0Z3 465 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 FAM227AF5H4B4 570 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 CYR61O00622 381 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 JMJD7P0C870 316 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 EFNA1P20827 205 aaPredicted RBP16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 FBLP22087 321 aaKnown RBP16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 WNT3P56703 355 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 PLIN5Q00G26 463 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 SNCBQ16143 134 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 PAGE3Q5JUK9 113 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 ARHGAP40Q5TG30 622 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 ANXA8L1Q5VT79 327 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 OR52E8Q6IFG1 317 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 FAM180BQ6P0A1 224 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 SLC48A1Q6P1K1 146 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 CEACAM20Q6UY09 585 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 MSANTD1Q6ZTZ1 278 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 SLC38A9Q8NBW4 561 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 OR51Q1Q8NH59 317 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 ADAMTS18Q8TE60 1221 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 PMEPA1Q969W9 287 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 BTBD10Q9BSF8 475 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 RBCK1Q9BYM8 510 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 PISDQ9UG56 409 aa16.8■□□□□ 0.28
PTCHD3-202ENST00000622555 ERAL1O75616 437 aaKnown RBP16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 ITGAXP20702 1163 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 ETV5P41161 510 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 XCR1P46094 333 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 RAB15P59190 212 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 EIF3IQ13347 325 aaKnown RBP16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 NFYCQ13952 458 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 DSG2Q14126 1118 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 C6orf10Q5SRN2 563 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 RBM15BQ8NDT2 890 aaKnown RBP16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 VPS37AQ8NEZ2 397 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 ITCHQ96J02 903 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 IL1RL2Q9HB29 575 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 SLC35C2Q9NQQ7 365 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 TAS2R7Q9NYW3 318 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 MAP10Q9P2G4 905 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 CES1P1Q9UKY3 287 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 PSME2Q9UL46 239 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 MAP4K5Q9Y4K4 846 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 PRSS51A0A1B0GVH4 220 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 PMS2P1A4D2B8 440 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 PLD2O14939 933 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 PDPK1O15530 556 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 CPNE3O75131 537 aaKnown RBP16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 HNRNPFP52597 415 aaKnown RBP16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 MPEG1Q2M385 716 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 DCAF12Q5T6F0 453 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 TMEM52Q8NDY8 209 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 DNAJB14Q8TBM8 379 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 GTF2H4Q92759 462 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 GBP5Q96PP8 586 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 PRDM9Q9NQV7 894 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 GIMAP4Q9NUV9 329 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 TRPC4Q9UBN4 977 aa16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 MRPS33Q9Y291 106 aaKnown RBP16.79■□□□□ 0.28
PTCHD3-202ENST00000622555 RNASET2O00584 256 aaKnown RBP16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 SCN2BO60939 215 aa16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 ZNF28P17035 718 aa16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 SLC25A3Q00325 362 aa16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 ABHD18Q0P651 414 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms