RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 SNX1Q13596 522 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 PTK6Q13882 451 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 RCN2Q14257 317 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 IMMTQ16891 758 aaKnown RBP3.39□□□□□ -1.87
BRCA1-229ENST00000621897 HFEQ30201 348 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 FAM106AQ4KMX7 169 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 NHSL2Q5HYW2 709 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 CENPPQ6IPU0 288 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 ZYG11AQ6WRX3 759 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 ERN2Q76MJ5 926 aaKnown RBP3.39□□□□□ -1.87
BRCA1-229ENST00000621897 OR4N5Q8IXE1 308 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 SIX6OS1Q8N1H7 587 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 SUMF1Q8NBK3 374 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 SUN5Q8TC36 379 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 CHURC1Q8WUH1 139 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 CASP10Q92851 521 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 ERO1AQ96HE7 468 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 SPATA33Q96N06 139 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 PRAM1Q96QH2 718 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 SLC39A3Q9BRY0 314 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 NAA11Q9BSU3 229 aaPredicted RBP3.39□□□□□ -1.87
BRCA1-229ENST00000621897 GCOM2Q9BZD3 368 aaPredicted RBP3.39□□□□□ -1.87
BRCA1-229ENST00000621897 SLC7A5P2Q9GIP4 190 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 DPH5Q9H2P9 285 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 RIMS4Q9H426 269 aaPredicted RBP3.39□□□□□ -1.87
BRCA1-229ENST00000621897 PHPT1Q9NRX4 125 aaPredicted RBP3.39□□□□□ -1.87
BRCA1-229ENST00000621897 GLRX2Q9NS18 164 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 ABCB8Q9NUT2 735 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 EXOC1Q9NV70 894 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 HMG20BQ9P0W2 317 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 FETUBQ9UGM5 382 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 TSPAN16Q9UKR8 245 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 PCDHGA1Q9Y5H4 931 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 NEDD4P46934 1319 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 HEG1Q9ULI3 1381 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 CTAGE15A4D2H0 777 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 ZNF840PA6NDX5 716 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 SLC9B1P1A6NJY1 282 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 H0YIV9 168 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 RNF113AO15541 343 aaKnown RBP3.38□□□□□ -1.87
BRCA1-229ENST00000621897 SPOPO43791 374 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 REC8O95072 547 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 LETM1O95202 739 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-229ENST00000621897 HPP00738 406 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 ALPPP05187 535 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 ASGR1P07306 291 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 HMOX1P09601 288 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 SUPT20HL2P0C7V6 817 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 DUX4L4P0CJ87 422 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 TPBGLP0DKB5 382 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 ALPPL2P10696 532 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 SFTPDP35247 375 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 RABIFP47224 123 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 CAMLGP49069 296 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 KHKP50053 298 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 PRELPP51888 382 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 NDUFV3P56181 108 aaKnown RBP3.38□□□□□ -1.87
BRCA1-229ENST00000621897 STX1BP61266 288 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 GABPB1Q06547 395 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-229ENST00000621897 TEFQ10587 303 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 KIAA0141Q14154 515 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-229ENST00000621897 PDK1Q15118 436 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 ANKRD20A4Q4UJ75 823 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 SLC39A12Q504Y0 691 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 ANKRD20A8PQ5CZ79 823 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 ANKRD20A2Q5SQ80 823 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 ANKRD20A1Q5TYW2 823 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 ANKRD20A3Q5VUR7 823 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 CST9LP1Q5W188 147 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 PPP1R21Q6ZMI0 780 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 MIER3Q7Z3K6 550 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 CTAGE6Q86UF2 777 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 RNF130Q86XS8 419 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 CCDC60Q8IWA6 550 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-229ENST00000621897 SLC22A15Q8IZD6 547 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 MYOCDQ8IZQ8 938 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 SYCP3Q8IZU3 236 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 SPERTQ8NA61 448 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 RPLP0P6Q8NHW5 317 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 PSMA8Q8TAA3 256 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 SLC13A3Q8WWT9 602 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 CORO2AQ92828 525 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 PYCR2Q96C36 320 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 SGF29Q96ES7 293 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 ZNF558Q96NG5 402 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 RUFY1Q96T51 708 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 KCNK16Q96T55 309 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 LRRCC1Q9C099 1032 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 SLC5A7Q9GZV3 580 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 VCPKMTQ9H867 229 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 FANCEQ9HB96 536 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 QPCTLQ9NXS2 382 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 CYP39A1Q9NYL5 469 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 IL36AQ9UHA7 158 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 ZNF107Q9UII5 783 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-229ENST00000621897 POMT2Q9UKY4 750 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 RPH3AQ9Y2J0 694 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-229ENST00000621897 CLCA3PQ9Y6N3 262 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 RNF123Q5XPI4 1314 aa3.38□□□□□ -1.87
BRCA1-229ENST00000621897 ZCCHC6Q5VYS8 1495 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms