RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 CENPNQ96H22 339 aaPredicted RBP20.3■□□□□ 0.84
SPAST-204ENST00000621856 MAP3K3Q99759 626 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 CIB1Q99828 191 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 GLIPR2Q9H4G4 154 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 C1GALT1Q9NS00 363 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 GIMAP4Q9NUV9 329 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 GPATCH2Q9NW75 528 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 SAMD4AQ9UPU9 718 aaKnown RBP20.3■□□□□ 0.84
SPAST-204ENST00000621856 LRCH1Q9Y2L9 728 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 CSNK1G3Q9Y6M4 447 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 RNF215Q9Y6U7 377 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 SDK1Q7Z5N4 2213 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 SAC3D1A6NKF1 404 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 ZNF682O95780 498 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 CPN2P22792 545 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 PCGF2P35227 344 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 BUD31P41223 144 aaPredicted RBP20.3■□□□□ 0.84
SPAST-204ENST00000621856 ARRB1P49407 418 aaPredicted RBP20.3■□□□□ 0.84
SPAST-204ENST00000621856 PRIM2P49643 509 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 VAC14Q08AM6 782 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 ATP6AP1Q15904 470 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 ZC3H12BQ5HYM0 836 aaKnown RBP20.3■□□□□ 0.84
SPAST-204ENST00000621856 SLC48A1Q6P1K1 146 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 MAL2Q969L2 176 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 AMDHD1Q96NU7 426 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 ELF4Q99607 663 aaPredicted RBP20.3■□□□□ 0.84
SPAST-204ENST00000621856 EPS8L2Q9H6S3 715 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 COQ10BQ9H8M1 238 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 LRIT1Q9P2V4 623 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 MRPS2Q9Y399 296 aaKnown RBP20.3■□□□□ 0.84
SPAST-204ENST00000621856 TNRC6BQ9UPQ9 1833 aaKnown RBP20.29■□□□□ 0.84
SPAST-204ENST00000621856 C9P02748 559 aa20.29■□□□□ 0.84
SPAST-204ENST00000621856 ALDH4A1P30038 563 aa20.29■□□□□ 0.84
SPAST-204ENST00000621856 KDELR2P33947 212 aa20.29■□□□□ 0.84
SPAST-204ENST00000621856 SPIDRQ14159 915 aa20.29■□□□□ 0.84
SPAST-204ENST00000621856 TMEM214Q6NUQ4 689 aaKnown RBP20.29■□□□□ 0.84
SPAST-204ENST00000621856 C1orf210Q8IVY1 113 aa20.29■□□□□ 0.84
SPAST-204ENST00000621856 PYURFQ96I23 114 aa20.29■□□□□ 0.84
SPAST-204ENST00000621856 TGM7Q96PF1 710 aa20.29■□□□□ 0.84
SPAST-204ENST00000621856 MAGIXQ9H6Y5 334 aa20.29■□□□□ 0.84
SPAST-204ENST00000621856 STARD5Q9NSY2 213 aa20.29■□□□□ 0.84
SPAST-204ENST00000621856 SIRT3Q9NTG7 399 aaPredicted RBP20.29■□□□□ 0.84
SPAST-204ENST00000621856 TMEM74BQ9NUR3 256 aa20.29■□□□□ 0.84
SPAST-204ENST00000621856 SUSD2Q9UGT4 822 aa20.29■□□□□ 0.84
SPAST-204ENST00000621856 RPS6KA6Q9UK32 745 aa20.29■□□□□ 0.84
SPAST-204ENST00000621856 PSME2Q9UL46 239 aa20.29■□□□□ 0.84
SPAST-204ENST00000621856 TNFRSF21O75509 655 aa20.28■□□□□ 0.84
SPAST-204ENST00000621856 EPHA4P54764 986 aa20.28■□□□□ 0.84
SPAST-204ENST00000621856 BNC1Q01954 994 aa20.28■□□□□ 0.84
SPAST-204ENST00000621856 TNFRSF17Q02223 184 aa20.28■□□□□ 0.84
SPAST-204ENST00000621856 RUNX2Q13950 521 aa20.28■□□□□ 0.84
SPAST-204ENST00000621856 NKG7Q16617 165 aa20.28■□□□□ 0.84
SPAST-204ENST00000621856 SAXO2Q658L1 398 aa20.28■□□□□ 0.84
SPAST-204ENST00000621856 MCATQ8IVS2 390 aaKnown RBP20.28■□□□□ 0.84
SPAST-204ENST00000621856 SLC25A45Q8N413 288 aa20.28■□□□□ 0.84
SPAST-204ENST00000621856 ARL10Q8N8L6 244 aa20.28■□□□□ 0.84
SPAST-204ENST00000621856 NCSTNQ92542 709 aa20.28■□□□□ 0.84
SPAST-204ENST00000621856 NEURL3Q96EH8 262 aa20.28■□□□□ 0.84
SPAST-204ENST00000621856 TCTN2Q96GX1 697 aa20.28■□□□□ 0.84
SPAST-204ENST00000621856 AHCYL2Q96HN2 611 aaKnown RBP20.28■□□□□ 0.84
SPAST-204ENST00000621856 CES1P1Q9UKY3 287 aa20.28■□□□□ 0.84
SPAST-204ENST00000621856 AK5Q9Y6K8 562 aa20.28■□□□□ 0.84
SPAST-204ENST00000621856 ZNF780BQ9Y6R6 833 aa20.28■□□□□ 0.84
SPAST-204ENST00000621856 COL6A3P12111 3177 aa20.28■□□□□ 0.84
SPAST-204ENST00000621856 ZNF860A6NHJ4 632 aa20.27■□□□□ 0.84
SPAST-204ENST00000621856 MYO1GB0I1T2 1018 aa20.27■□□□□ 0.84
SPAST-204ENST00000621856 C8orf89P0DMQ9 161 aa20.27■□□□□ 0.84
SPAST-204ENST00000621856 CKMT2P17540 419 aa20.27■□□□□ 0.84
SPAST-204ENST00000621856 CSNK2A2P19784 350 aaPredicted RBP20.27■□□□□ 0.84
SPAST-204ENST00000621856 CCT3P49368 545 aaKnown RBP20.27■□□□□ 0.84
SPAST-204ENST00000621856 CCT8P50990 548 aa20.27■□□□□ 0.84
SPAST-204ENST00000621856 LIM2P55344 173 aa20.27■□□□□ 0.84
SPAST-204ENST00000621856 RBBP4Q09028 425 aa20.27■□□□□ 0.84
SPAST-204ENST00000621856 PLK5Q496M5 336 aa20.27■□□□□ 0.84
SPAST-204ENST00000621856 ZBTB49Q6ZSB9 765 aa20.27■□□□□ 0.84
SPAST-204ENST00000621856 SZRD1Q7Z422 152 aa20.27■□□□□ 0.84
SPAST-204ENST00000621856 GALNT10Q86SR1 603 aa20.27■□□□□ 0.84
SPAST-204ENST00000621856 CNRIP1Q96F85 164 aaPredicted RBP20.27■□□□□ 0.84
SPAST-204ENST00000621856 VPS50Q96JG6 964 aa20.27■□□□□ 0.84
SPAST-204ENST00000621856 ZSCAN32Q9NX65 697 aa20.27■□□□□ 0.84
SPAST-204ENST00000621856 PILRBQ9UKJ0 227 aa20.27■□□□□ 0.84
SPAST-204ENST00000621856 CNOT11Q9UKZ1 510 aaKnown RBP20.27■□□□□ 0.84
SPAST-204ENST00000621856 TXNDC9O14530 226 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 CLOCKO15516 846 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 HCRTR1O43613 425 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 KIF1CO43896 1103 aaKnown RBP20.27■□□□□ 0.83
SPAST-204ENST00000621856 DEAF1O75398 565 aaPredicted RBP20.27■□□□□ 0.83
SPAST-204ENST00000621856 TLX1P31314 330 aaPredicted RBP20.27■□□□□ 0.83
SPAST-204ENST00000621856 FEN1P39748 380 aaKnown RBP20.27■□□□□ 0.83
SPAST-204ENST00000621856 RXRGP48443 463 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 GFERP55789 205 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 DSTNP60981 165 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 OLR1P78380 273 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 COL9A2Q14055 689 aaPredicted RBP20.27■□□□□ 0.83
SPAST-204ENST00000621856 SCARB2Q14108 478 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 ZNF750Q32MQ0 723 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 NKAIN2Q5VXU1 208 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 C6orf120Q7Z4R8 191 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 SLC35F3Q8IY50 421 aa20.27■□□□□ 0.83
SPAST-204ENST00000621856 MAML2Q8IZL2 1156 aaPredicted RBP20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms