RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 SLC6A9P48067 706 aa6.92□□□□□ -1.3
COLCA1-205ENST00000620864 AQP11Q8NBQ7 271 aa6.92□□□□□ -1.3
COLCA1-205ENST00000620864 CHDHQ8NE62 594 aaPredicted RBP6.92□□□□□ -1.3
COLCA1-205ENST00000620864 CASTOR1Q8WTX7 329 aa6.92□□□□□ -1.3
COLCA1-205ENST00000620864 INSL6Q9Y581 213 aa6.92□□□□□ -1.3
COLCA1-205ENST00000620864 PCDHGA5Q9Y5G8 931 aa6.92□□□□□ -1.3
COLCA1-205ENST00000620864 MEGF11A6BM72 1044 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 H7C1Q1 480 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 TYRP14679 529 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 POU2F1P14859 743 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 MYBPHQ13203 477 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 CAMK2DQ13557 499 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 PTPRRQ15256 657 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 TARBP2Q15633 366 aaKnown RBP6.91□□□□□ -1.3
COLCA1-205ENST00000620864 LRRC55Q6ZSA7 311 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 DCP2Q8IU60 420 aaKnown RBP6.91□□□□□ -1.3
COLCA1-205ENST00000620864 REEP4Q9H6H4 257 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 APMAPQ9HDC9 416 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 FZD4Q9ULV1 537 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 PIGRP01833 764 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 AMY2BP19961 511 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 MMP8P22894 467 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 RABGGTBP53611 331 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 FXYD6P3P58550 94 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 GPX6P59796 221 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 HSPB3Q12988 150 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 MEF2DQ14814 521 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 BEND4Q6ZU67 534 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 CPT1BQ92523 772 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 MAL2Q969L2 176 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 VPS25Q9BRG1 176 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 STRA6Q9BX79 667 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 TSPAN10Q9H1Z9 355 aaPredicted RBP6.91□□□□□ -1.3
COLCA1-205ENST00000620864 CRTAC1Q9NQ79 661 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 A0A0G2JLL6 359 aaPredicted RBP6.91□□□□□ -1.3
COLCA1-205ENST00000620864 ZNF705GA8MUZ8 300 aaPredicted RBP6.91□□□□□ -1.3
COLCA1-205ENST00000620864 J3QLW9 94 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 SCDO00767 359 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 EEF1E1O43324 174 aaKnown RBP6.91□□□□□ -1.3
COLCA1-205ENST00000620864 HTRA2O43464 458 aaPredicted RBP6.91□□□□□ -1.3
COLCA1-205ENST00000620864 NFATC1O95644 943 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 HEXBP07686 556 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 ZNF19P17023 458 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 EIF2B1Q14232 305 aaKnown RBP6.91□□□□□ -1.3
COLCA1-205ENST00000620864 SF3A2Q15428 464 aaKnown RBP6.91□□□□□ -1.3
COLCA1-205ENST00000620864 GPR33Q49SQ1 333 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 MLIPQ5VWP3 458 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 PDE12Q6L8Q7 609 aaKnown RBP6.91□□□□□ -1.3
COLCA1-205ENST00000620864 IRF2BP2Q7Z5L9 587 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 PRRT2Q7Z6L0 340 aaPredicted RBP6.91□□□□□ -1.3
COLCA1-205ENST00000620864 ADGRA1Q86SQ6 560 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 RDH10Q8IZV5 341 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 OR52E4Q8NGH9 312 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 TRIB2Q92519 343 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 GPR21Q99679 349 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 MAGEH1Q9H213 219 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 SLC38A1Q9H2H9 487 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 TMPRSS4Q9NRS4 437 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 KLHL13Q9P2N7 655 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 KLHL21Q9UJP4 597 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 A0A0G2JN53 185 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 BPIP17213 487 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 ARSFP54793 590 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 CHAF1BQ13112 559 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 KCNC3Q14003 757 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 RAB35Q15286 201 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 FAM46BQ96A09 425 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 LMLNQ96KR4 655 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 ALPK1Q96QP1 1244 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 BARD1Q99728 777 aaKnown RBP6.91□□□□□ -1.3
COLCA1-205ENST00000620864 SLC25A31Q9H0C2 315 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 VPS29Q9UBQ0 182 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 AP1M2Q9Y6Q5 423 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 A0A0D9SG52 128 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 A0A1W2PS29 197 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 PCDH7O60245 1069 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 PIM1P11309 404 aaPredicted RBP6.91□□□□□ -1.3
COLCA1-205ENST00000620864 INHBCP55103 352 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 TSTD2Q5T7W7 516 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.91□□□□□ -1.3
COLCA1-205ENST00000620864 RFPL4BQ6ZWI9 263 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 MEPCEQ7L2J0 689 aaKnown RBP6.91□□□□□ -1.3
COLCA1-205ENST00000620864 SLC7A5P1Q8MH63 180 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 PYROXD2Q8N2H3 581 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 CANT1Q8WVQ1 401 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 LGALS12Q96DT0 336 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 TTYH2Q9BSA4 534 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 SLC22A11Q9NSA0 550 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 GRHPRQ9UBQ7 328 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 PCTPQ9UKL6 214 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 TRBC2A0A5B9 178 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 MATN3O15232 486 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 TLR5O60602 858 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 PCCBP05166 539 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 CDKN2BP42772 138 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 CRYBB1P53674 252 aaPredicted RBP6.91□□□□□ -1.3
COLCA1-205ENST00000620864 RHBDL3P58872 404 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 TAS2R30P59541 319 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 SELENOVP59797 346 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 TOR1AIP1Q5JTV8 583 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms