RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 SH2B3Q9UQQ2 575 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 OSGIN2Q9Y236 505 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 UGDHO60701 494 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 JRKO75564 520 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 SERPINA7P05543 415 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 C8orf89P0DMQ9 161 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 IL1RNP18510 177 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 COL8A1P27658 744 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 SNRPNP63162 240 aaKnown RBP15.17■□□□□ 0.02
CD40-207ENST00000620709 RELAQ04206 551 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 FAM53BQ14153 422 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 SPRED3Q2MJR0 410 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 FAM219BQ5XKK7 198 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 RNF165Q6ZSG1 346 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 PRSS41Q7RTY9 318 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 C17orf64Q86WR6 236 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 CCDC106Q9BWC9 280 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 PCBD2Q9H0N5 130 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 GPRC5BQ9NZH0 403 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 SCN3AQ9NY46 2000 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 TEX15Q9BXT5 2789 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 IGHV3-20A0A0C4DH32 117 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 CAPN14A8MX76 684 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 SGK494L7N484 410 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 CLGNO14967 610 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 UNC5CO95185 931 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 BMP10O95393 424 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 LINC00032P0C843 101 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 ITGAMP11215 1152 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 CDH1P12830 882 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 CCND1P24385 295 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 HRH2P25021 359 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 GRK3P35626 688 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 CSNK1G2P78368 415 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 XKR7Q5GH72 579 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 B3GNTL1Q67FW5 361 aaPredicted RBP15.16■□□□□ 0.02
CD40-207ENST00000620709 LARP4Q71RC2 724 aaKnown RBP eCLIP15.16■□□□□ 0.02
CD40-207ENST00000620709 VN1R4Q7Z5H5 301 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 MYLK4Q86YV6 388 aaPredicted RBP15.16■□□□□ 0.02
CD40-207ENST00000620709 ARHGEF39Q8N4T4 335 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 L3MBTL4Q8NA19 623 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 CAMKVQ8NCB2 501 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 ST6GALNAC3Q8NDV1 305 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 C3orf30Q96M34 536 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 SGPP1Q9BX95 441 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 TGIF2Q9GZN2 237 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 RNF11Q9Y3C5 154 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 CAPN7Q9Y6W3 813 aa15.16■□□□□ 0.02
CD40-207ENST00000620709 OR2W5A6NFC9 320 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 A8MUI8 341 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 SLC22A2O15244 555 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 HNRNPCL1O60812 293 aaKnown RBP15.15■□□□□ 0.02
CD40-207ENST00000620709 SEC24DO94855 1032 aaPredicted RBP15.15■□□□□ 0.02
CD40-207ENST00000620709 LDLRP01130 860 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 KRT6AP02538 564 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 KRT6BP04259 564 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 SERPIND1P05546 499 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 ADSLP30566 484 aaPredicted RBP15.15■□□□□ 0.02
CD40-207ENST00000620709 BCL6P41182 706 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 SCTRP47872 440 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 KRT6CP48668 564 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 MEF2AQ02078 507 aaPredicted RBP15.15■□□□□ 0.02
CD40-207ENST00000620709 IRF8Q02556 426 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 PCDH1Q08174 1060 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 CHIT1Q13231 466 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 PCOLCEQ15113 449 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 TCHHL1Q5QJ38 904 aaPredicted RBP15.15■□□□□ 0.02
CD40-207ENST00000620709 LIPJQ5W064 366 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 ASPGQ86U10 573 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 SHISA5Q8N114 240 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 KCT2Q8NC54 265 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 OR51Q1Q8NH59 317 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 FAR1Q8WVX9 515 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 SLC13A3Q8WWT9 602 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 PSMF1Q92530 271 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 TUBGCP3Q96CW5 907 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 NSL1Q96IY1 281 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 OR4K3Q96R72 315 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 BARD1Q99728 777 aaKnown RBP15.15■□□□□ 0.02
CD40-207ENST00000620709 ZNF700Q9H0M5 742 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 ZNF385DQ9H6B1 395 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 AKTIPQ9H8T0 292 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 ANKHQ9HCJ1 492 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 ARL8BQ9NVJ2 186 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 SNX6Q9UNH7 406 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 DYRK1BQ9Y463 629 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 PTGDR2Q9Y5Y4 395 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 KCNE2Q9Y6J6 123 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 SVILO95425 2214 aa15.15■□□□□ 0.02
CD40-207ENST00000620709 CENPEQ02224 2701 aa15.14■□□□□ 0.01
CD40-207ENST00000620709 KCNE1BA0A087WTH5 132 aa15.14■□□□□ 0.01
CD40-207ENST00000620709 ATP6AP2A0A1C7CYW4 349 aa15.14■□□□□ 0.01
CD40-207ENST00000620709 H0YIG0 161 aa15.14■□□□□ 0.01
CD40-207ENST00000620709 UBDO15205 165 aa15.14■□□□□ 0.01
CD40-207ENST00000620709 LRRTM2O43300 516 aa15.14■□□□□ 0.01
CD40-207ENST00000620709 LCMT2O60294 686 aaKnown RBP15.14■□□□□ 0.01
CD40-207ENST00000620709 ATP6AP2O75787 350 aa15.14■□□□□ 0.01
CD40-207ENST00000620709 NSA2O95478 260 aaKnown RBP15.14■□□□□ 0.01
CD40-207ENST00000620709 EDN3P14138 238 aa15.14■□□□□ 0.01
CD40-207ENST00000620709 LBPP18428 481 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms