RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 CCDC107Q8WV48 283 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 CYP8B1Q9UNU6 501 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 CACNB4O00305 520 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 HPRP00739 348 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 HLA-DQB2P05538 268 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 SRPRAP08240 638 aaKnown RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 EDNRBP24530 442 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 PPP3R1P63098 170 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 PRPF38BQ5VTL8 546 aaKnown RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 RD3Q7Z3Z2 195 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 SENP8Q96LD8 212 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.84□□□□□ -1.635e-7■■□□□ 13.2
VPS13D-214ENST00000620676 PORCNQ9H237 461 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 NSUN3Q9H649 340 aaKnown RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 AK6Q9Y3D8 172 aaKnown RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 KLK1P06870 262 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 ADRB1P08588 477 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 VAMP2P63027 116 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 PRR5P85299 388 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 ACY1Q03154 408 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 ABRAXAS2Q15018 415 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 SLC25A52Q3SY17 297 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 PLBD1Q6P4A8 553 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 RNF111Q6ZNA4 994 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 S100A16Q96FQ6 103 aaKnown RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 LRR1Q96L50 414 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 SIGLEC10Q96LC7 697 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 GAL3ST4Q96RP7 486 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 TRMOQ9BU70 441 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 FAIM2Q9BWQ8 316 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 GLIS2Q9BZE0 524 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 RCOR3Q9P2K3 495 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 TCAPO15273 167 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 C7P10643 843 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 NAA10P41227 235 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 GPR4P46093 362 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 NFKB2Q00653 900 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 E2F1Q01094 437 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 PUM1Q14671 1186 aaKnown RBP eCLIP4.84□□□□□ -1.639e-7■□□□□ 9.3
VPS13D-214ENST00000620676 OPCMLQ14982 345 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 LRRC26Q2I0M4 334 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 SLC39A12Q504Y0 691 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 TCTE1Q5JU00 501 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 RETREG3Q86VR2 466 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 SLC22A15Q8IZD6 547 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 CELF5Q8N6W0 485 aaKnown RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 IL17RDQ8NFM7 739 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 BRI3BPQ8WY22 251 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 RRNAD1Q96FB5 475 aaKnown RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 C1orf74Q96LT6 269 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF70Q9UC06 446 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 FLVCR2Q9UPI3 526 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 RASD1Q9Y272 281 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 MYH13Q9UKX3 1938 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 TCRBV16S1A1N1A0A5B0 115 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 ALDH2P05091 517 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 GPX3P22352 226 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 CFL1P23528 166 aaKnown RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 PTGER1P34995 402 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 DAPP51397 102 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 CASP6P55212 293 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 SOWAHAQ2M3V2 549 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 CRB2Q5IJ48 1285 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 TMEM192Q8IY95 271 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 FAM185AQ8N0U4 392 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 TMIEQ8NEW7 156 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 RHNO1Q9BSD3 238 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 SLC39A8Q9C0K1 460 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 hCG_1809904A0A1W2PP81 198 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 A0A1W2PR64 198 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 A0A1W2PRV1 198 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 CREBL2O60519 120 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 NUDT14O95848 222 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 CCND3P30281 292 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 GOLGA7Q7Z5G4 137 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 BBS10Q8TAM1 723 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 PRMT6Q96LA8 375 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 PIP5K1AQ99755 562 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 ACBD6Q9BR61 282 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 TMEM121BQ9BXQ6 578 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 PTPRJQ12913 1337 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 SAMD9LQ8IVG5 1584 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 A0A1W2PQH9 124 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 TCRBV3S1A0A5B6 114 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 SOX30O94993 753 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 C6orf47O95873 294 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 CHRNEQ04844 493 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 APOOLQ6UXV4 268 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 OR7G3Q8NG95 312 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 OR2L8Q8NGY9 312 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 FATE1Q969F0 183 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 SERPINB11Q96P15 392 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 A0A0B4J2A0 478 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 GLYATL1P3A0A0U1RQE8 302 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 P4HA3Q7Z4N8 544 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 LIN37Q96GY3 246 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 JSRP1Q96MG2 331 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 TM6SF2Q9BZW4 377 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 UPB1Q9UBR1 384 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms