RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 MGLLQ99685 303 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 TTYH2Q9BSA4 534 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 CPEB1Q9BZB8 566 aaKnown RBP6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 TPT1P8Q9HAU6 139 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 SNTG1Q9NSN8 517 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 OBP2AQ9NY56 170 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 VNN3Q9NY84 501 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 GPRC5BQ9NZH0 403 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 NPAP1Q9NZP6 1156 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 FZD4Q9ULV1 537 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 MAPRE3Q9UPY8 281 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 A0A1W2PQ67 120 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 GUCY1B2O75343 617 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 KCNK2O95069 426 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 OR56A5P0C7T3 313 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 ITPKAP23677 461 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 BMP8BP34820 402 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 SPAM1P38567 509 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 SOX9P48436 509 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 IQCCQ4KMZ1 466 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 BRAT1Q6PJG6 821 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 TMEM184AQ6ZMB5 413 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 GDPD3Q7L5L3 318 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 ENTHD1Q8IYW4 607 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 GANCQ8TET4 914 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 GTPBP3Q969Y2 492 aaKnown RBP6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 DACT3Q96B18 629 aaPredicted RBP6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 PYCR2Q96C36 320 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 PDLIM5Q96HC4 596 aaKnown RBP6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 MAGEB10Q96LZ2 347 aaPredicted RBP6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 BARD1Q99728 777 aaKnown RBP6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 ALOXE3Q9BYJ1 711 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 SMURF1Q9HCE7 757 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 RAD18Q9NS91 495 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 DNAJC11Q9NVH1 559 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 FAM120CQ9NX05 1096 aaKnown RBP6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 MS4A12Q9NXJ0 267 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 PSORS1C1Q9UIG5 152 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 DLGAP4Q9Y2H0 992 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 SLC27A6Q9Y2P4 619 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 MAP4K5Q9Y4K4 846 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 PMF1-BGLAPU3KQ54 211 aa6.69□□□□□ -1.34
SRGAP3-213ENST00000618999 ZNF891A8MT65 544 aaPredicted RBP6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 CCNB2O95067 398 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 PRNPP04156 253 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 BPIP17213 487 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 CD9P21926 228 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 GGT2P36268 569 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 ZNF267Q14586 743 aaPredicted RBP6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 ZNF234Q14588 700 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 BCL7AQ4VC05 210 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 SBSNQ6UWP8 590 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 LSRQ86X29 649 aaPredicted RBP6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 SFTPA1Q8IWL2 248 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 MSRB3Q8IXL7 192 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 DNAJC22Q8N4W6 341 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 SETD6Q8TBK2 473 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 EID2BQ96D98 161 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 CHFRQ96EP1 664 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 DIRAS2Q96HU8 199 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 HRASLS5Q96KN8 279 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 MRGPRX3Q96LB0 322 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 DUSP26Q9BV47 211 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 ASPNQ9BXN1 380 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 ACPTQ9BZG2 426 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 IL26Q9NPH9 171 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 FBXO10Q9UK96 956 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 N6AMT1Q9Y5N5 214 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 SNX4O95219 450 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 OPN1SWP03999 348 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 SPNP16150 400 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 CLCN7P51798 805 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 FCHO2Q0JRZ9 810 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 CHIT1Q13231 466 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 TP53BP2Q13625 1128 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 EIF4HQ15056 248 aaKnown RBP6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 ZNF805Q5CZA5 627 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 XKR6Q5GH73 641 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 LRIF1Q5T3J3 769 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 FRG2Q64ET8 278 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 LAIR2Q6ISS4 152 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 MZT2BQ6NZ67 158 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 RFLNAQ6ZTI6 216 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 MSANTD1Q6ZTZ1 278 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 CBLL1Q75N03 491 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 LRRC70Q7Z2Q7 622 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 TRIM46Q7Z4K8 759 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 KIAA1958Q8N8K9 716 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 DENND6BQ8NEG7 585 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 OR4A15Q8NGL6 344 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 GGHQ92820 318 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 TP53INP1Q96A56 240 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 FRG2BQ96QU4 278 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 GAS2L1Q99501 681 aaPredicted RBP6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 COPS8Q99627 209 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 EPYCQ99645 322 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 WRAP53Q9BUR4 548 aaKnown RBP6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 NTMT1Q9BV86 223 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 TIGARQ9NQ88 270 aa6.68□□□□□ -1.34
SRGAP3-213ENST00000618999 PRDM8Q9NQV8 689 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms