RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 NUDT13Q86X67 352 aa14.94□□□□□ -0.02
BRCA1-228ENST00000618469 TICAM1Q8IUC6 712 aa14.94□□□□□ -0.02
BRCA1-228ENST00000618469 SLC22A9Q8IVM8 553 aa14.94□□□□□ -0.02
BRCA1-228ENST00000618469 ZCCHC7Q8N3Z6 543 aaKnown RBP14.94□□□□□ -0.02
BRCA1-228ENST00000618469 OR1N1Q8NGS0 311 aa14.94□□□□□ -0.02
BRCA1-228ENST00000618469 ELP5Q8TE02 316 aa14.94□□□□□ -0.02
BRCA1-228ENST00000618469 AENQ8WTP8 325 aaKnown RBP14.94□□□□□ -0.02
BRCA1-228ENST00000618469 ZNF354BQ96LW1 612 aa14.94□□□□□ -0.02
BRCA1-228ENST00000618469 SERPINI1Q99574 410 aa14.94□□□□□ -0.02
BRCA1-228ENST00000618469 NPAS2Q99743 824 aa14.94□□□□□ -0.02
BRCA1-228ENST00000618469 ZNF717Q9BY31 904 aaPredicted RBP14.94□□□□□ -0.02
BRCA1-228ENST00000618469 STMN3Q9NZ72 180 aa14.94□□□□□ -0.02
BRCA1-228ENST00000618469 TRPS1Q9UHF7 1281 aa14.94□□□□□ -0.02
BRCA1-228ENST00000618469 DCDC2Q9UHG0 476 aa14.94□□□□□ -0.02
BRCA1-228ENST00000618469 PHF11Q9UIL8 331 aa14.94□□□□□ -0.02
BRCA1-228ENST00000618469 EMCNQ9ULC0 261 aa14.94□□□□□ -0.02
BRCA1-228ENST00000618469 NTNG1Q9Y2I2 539 aa14.94□□□□□ -0.02
BRCA1-228ENST00000618469 CSMD1Q96PZ7 3565 aa14.94□□□□□ -0.02
BRCA1-228ENST00000618469 TRBV11-1A0A0K0K1C0 115 aa14.93□□□□□ -0.02
BRCA1-228ENST00000618469 MYOCOSA0A1B0GUC4 107 aa14.93□□□□□ -0.02
BRCA1-228ENST00000618469 SYNDIG1LA6NDD5 238 aa14.93□□□□□ -0.02
BRCA1-228ENST00000618469 WIPF3A6NGB9 483 aa14.93□□□□□ -0.02
BRCA1-228ENST00000618469 PRKRAO75569 313 aaKnown RBP14.93□□□□□ -0.02
BRCA1-228ENST00000618469 OR4F21O95013 312 aa14.93□□□□□ -0.02
BRCA1-228ENST00000618469 SEMA3DO95025 777 aa14.93□□□□□ -0.02
BRCA1-228ENST00000618469 IFNA16P05015 189 aa14.93□□□□□ -0.02
BRCA1-228ENST00000618469 MYL2P10916 166 aa14.93□□□□□ -0.02
BRCA1-228ENST00000618469 PRF1P14222 555 aa14.93□□□□□ -0.02
BRCA1-228ENST00000618469 ARFIP1P53367 373 aa14.93□□□□□ -0.02
BRCA1-228ENST00000618469 RASA2Q15283 850 aa14.93□□□□□ -0.02
BRCA1-228ENST00000618469 TERF2Q15554 542 aa14.93□□□□□ -0.02
BRCA1-228ENST00000618469 C10orf62Q5T681 223 aaPredicted RBP14.93□□□□□ -0.02
BRCA1-228ENST00000618469 WDR93Q6P2C0 686 aa14.93□□□□□ -0.02
BRCA1-228ENST00000618469 CYP20A1Q6UW02 462 aa14.93□□□□□ -0.02
BRCA1-228ENST00000618469 C4orf33Q8N1A6 199 aa14.93□□□□□ -0.02
BRCA1-228ENST00000618469 NFAM1Q8NET5 270 aaPredicted RBP14.93□□□□□ -0.02
BRCA1-228ENST00000618469 B3GNT7Q8NFL0 401 aa14.93□□□□□ -0.02
BRCA1-228ENST00000618469 HAS2Q92819 552 aa14.93□□□□□ -0.02
BRCA1-228ENST00000618469 LYARQ9NX58 379 aaKnown RBP14.93□□□□□ -0.02
BRCA1-228ENST00000618469 ANKRD10Q9NXR5 420 aa14.93□□□□□ -0.02
BRCA1-228ENST00000618469 PPT2Q9UMR5 302 aa14.93□□□□□ -0.02
BRCA1-228ENST00000618469 COPG1Q9Y678 874 aaKnown RBP14.93□□□□□ -0.02
BRCA1-228ENST00000618469 CNTRLQ7Z7A1 2325 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 A0A0A6YYD5 115 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 TLDC2A0PJX2 215 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 ARHGAP10A1A4S6 786 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 GABRR3A8MPY1 467 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 COPEO14579 308 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 TMPRSS11DO60235 418 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 CTNSO60931 367 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 PROCP04070 461 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 NUDT17P0C025 328 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 NR2F6P10588 404 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 ELAVL4P26378 380 aaKnown RBP14.92□□□□□ -0.02
BRCA1-228ENST00000618469 BSGP35613 385 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 BUD31P41223 144 aaPredicted RBP14.92□□□□□ -0.02
BRCA1-228ENST00000618469 CLCN2P51788 898 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 PRKAA2P54646 552 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 IFFO1Q0D2I5 559 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 ELAVL1Q15717 326 aaKnown RBP14.92□□□□□ -0.02
BRCA1-228ENST00000618469 ERCC6LQ2NKX8 1250 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 C18orf63Q68DL7 685 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 FAM180AQ6UWF9 173 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 ZYG11AQ6WRX3 759 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 SH2D5Q6ZV89 423 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 GPRIN3Q6ZVF9 776 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 GPR180Q86V85 440 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 LGI4Q8N135 537 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 CDYL2Q8N8U2 506 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 CCDC63Q8NA47 563 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 APCDD1LQ8NCL9 501 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 SUN3Q8TAQ9 357 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 SELENOMQ8WWX9 145 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 NCLNQ969V3 563 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 L3HYPDHQ96EM0 354 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 VMP1Q96GC9 406 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 ZNF382Q96SR6 550 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 HBEGFQ99075 208 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 MRPL1Q9BYD6 325 aaKnown RBP14.92□□□□□ -0.02
BRCA1-228ENST00000618469 ALOXE3Q9BYJ1 711 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 DEFB126Q9BYW3 111 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 FARSBQ9NSD9 589 aaKnown RBP14.92□□□□□ -0.02
BRCA1-228ENST00000618469 MS4A12Q9NXJ0 267 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 ZNF225Q9UK10 706 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 SNX6Q9UNH7 406 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 SLC12A4Q9UP95 1085 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 ATG4BQ9Y4P1 393 aa14.92□□□□□ -0.02
BRCA1-228ENST00000618469 DIDO1Q9BTC0 2240 aaKnown RBP14.91□□□□□ -0.02
BRCA1-228ENST00000618469 FGF17O60258 216 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 PLIN3O60664 434 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 MLYCDO95822 493 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 PDYNP01213 254 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 GBAP04062 536 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 KRT4P19013 534 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 IMPDH1P20839 514 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 TLX1P31314 330 aaPredicted RBP14.91□□□□□ -0.02
BRCA1-228ENST00000618469 CCT5P48643 541 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 LCP2Q13094 533 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 TUBA3CQ13748 450 aa14.91□□□□□ -0.02
BRCA1-228ENST00000618469 SERTAD2Q14140 314 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms