RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 KCNK10P57789 538 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 NR6A1Q15406 480 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 BICRALQ6AI39 1079 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 WDR93Q6P2C0 686 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 COMMD6Q7Z4G1 85 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 EXOC3L1Q86VI1 746 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 TCAIMQ8N3R3 496 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 CLHC1Q8NHS4 586 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 GRHL3Q8TE85 626 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 METTL21AQ8WXB1 218 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 THAP11Q96EK4 314 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 C3orf30Q96M34 536 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 ADNPQ9H2P0 1102 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 PRTFDC1Q9NRG1 225 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 SH3BGRL2Q9UJC5 107 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 EXO1Q9UQ84 846 aaKnown RBP5.31□□□□□ -1.56
CPNE3-208ENST00000614678 POLR3HQ9Y535 204 aaPredicted RBP5.31□□□□□ -1.56
CPNE3-208ENST00000614678 TRBV11-1A0A0K0K1C0 115 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 H0YIV9 168 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 PROM1O43490 865 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 B3GALT2O43825 422 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 DDAH2O95865 285 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 IMPDH1P20839 514 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 MTTPP55157 894 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 STXBP1P61764 594 aaKnown RBP5.31□□□□□ -1.56
CPNE3-208ENST00000614678 DUSP8Q13202 625 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 CRB2Q5IJ48 1285 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 ACER2Q5QJU3 275 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 TTC19Q6DKK2 380 aaPredicted RBP5.31□□□□□ -1.56
CPNE3-208ENST00000614678 FAM111BQ6SJ93 734 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 OR5M3Q8NGP4 307 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 AGAP11Q8TF27 550 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 SELENOMQ8WWX9 145 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 NTMT1Q9BV86 223 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 KCNK13Q9HB14 408 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 SLAMF7Q9NQ25 335 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 DEPPQ9NTK1 212 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 BAIAP2L1Q9UHR4 511 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 PKDREJQ9NTG1 2253 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 MANBAO00462 879 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 SMIM24O75264 130 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 OR2J2O76002 312 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 NEURL1O76050 574 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 CLPSP04118 112 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 SERPINA7P05543 415 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 PIM1P11309 404 aaPredicted RBP5.31□□□□□ -1.56
CPNE3-208ENST00000614678 CPN2P22792 545 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 RAB38P57729 211 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 ARG2P78540 354 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 SLC18A2Q05940 514 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 ACTN3Q08043 901 aaPredicted RBP5.31□□□□□ -1.56
CPNE3-208ENST00000614678 CDSNQ15517 529 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 VWA5B1Q5TIE3 1220 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 KBTBD2Q8IY47 623 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 PRR22Q8IZ63 422 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 CPSF7Q8N684 471 aaKnown RBP5.31□□□□□ -1.56
CPNE3-208ENST00000614678 PLPP5Q8NEB5 264 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 PRR7Q8TB68 274 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 ELP5Q8TE02 316 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 MIB2Q96AX9 1013 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 KCNC2Q96PR1 638 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 FAM129AQ9BZQ8 928 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 C14orf105Q9NVL8 296 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 NXT1Q9UKK6 140 aaKnown RBP5.31□□□□□ -1.56
CPNE3-208ENST00000614678 RAB21Q9UL25 225 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 AKAP6Q13023 2319 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 C2orf72A6NCS6 295 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 STX16-NPEPL1H3BU86 382 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 TXNDC9O14530 226 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 COPEO14579 308 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 STX16O14662 325 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 UQCRHP07919 91 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 NUDT17P0C025 328 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 FAM58BPP0C7Q3 252 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 LINC00032P0C843 101 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 TNFSF10P50591 281 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 RAP1GDS1P52306 607 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 RRADP55042 308 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 FOXK1P85037 733 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 EXOSC7Q15024 291 aaKnown RBP5.31□□□□□ -1.56
CPNE3-208ENST00000614678 CEP85LQ5SZL2 805 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 LIPJQ5W064 366 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 PLAG1Q6DJT9 500 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 MRM1Q6IN84 353 aaKnown RBP5.31□□□□□ -1.56
CPNE3-208ENST00000614678 PLXDC2Q6UX71 529 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 ISLR2Q6UXK2 745 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 ZYG11AQ6WRX3 759 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 Q6ZS92 163 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 GALNT10Q86SR1 603 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 C9orf40Q8IXQ3 194 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 IQCKQ8N0W5 287 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 CDC26Q8NHZ8 85 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 METTL6Q8TCB7 284 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 PPP4R1Q8TF05 950 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 ILKAPQ9H0C8 392 aaPredicted RBP5.31□□□□□ -1.56
CPNE3-208ENST00000614678 TSPYL1Q9H0U9 437 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 RPF2Q9H7B2 306 aaKnown RBP5.31□□□□□ -1.56
CPNE3-208ENST00000614678 TUBD1Q9UJT1 453 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 DLGAP4Q9Y2H0 992 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 PLLPQ9Y342 182 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms