RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 CBSLP0DN79 551 aa13.26□□□□□ -0.29
CHD1-212ENST00000614616 SHMT1P34896 483 aa13.26□□□□□ -0.29
CHD1-212ENST00000614616 CBSP35520 551 aa13.26□□□□□ -0.29
CHD1-212ENST00000614616 LY6KQ17RY6 165 aa13.26□□□□□ -0.29
CHD1-212ENST00000614616 ENPP6Q6UWR7 440 aa13.26□□□□□ -0.29
CHD1-212ENST00000614616 ZER1Q7Z7L7 766 aa13.26□□□□□ -0.29
CHD1-212ENST00000614616 C12orf40Q86WS4 652 aa13.26□□□□□ -0.29
CHD1-212ENST00000614616 FBXO16Q8IX29 292 aaPredicted RBP13.26□□□□□ -0.29
CHD1-212ENST00000614616 GTF2IRD1Q9UHL9 959 aa13.26□□□□□ -0.29
CHD1-212ENST00000614616 HOXA2O43364 376 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 BMP4P12644 408 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 SSTR4P31391 388 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 PBX3P40426 434 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 FKBP10Q96AY3 582 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 OPA3Q9H6K4 179 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 AGAP14A8MT82 685 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 E7ESA3 106 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 RPP14O95059 124 aaKnown RBP13.25□□□□□ -0.29
CHD1-212ENST00000614616 CAPNS1P04632 268 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 VEGFAP15692 232 aaPredicted RBP13.25□□□□□ -0.29
CHD1-212ENST00000614616 JUNDP17535 347 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 ITPKBP27987 946 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 HSD11B1P28845 292 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 CEACAM7Q14002 265 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 FAM214AQ32MH5 1076 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 UBE2NLQ5JXB2 153 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 ZNF648Q5T619 568 aaPredicted RBP13.25□□□□□ -0.29
CHD1-212ENST00000614616 ZNF546Q86UE3 836 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 TMEM200AQ86VY9 491 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 VPS25Q9BRG1 176 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 SLC19A3Q9BZV2 496 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 MKKSQ9NPJ1 570 aaPredicted RBP13.25□□□□□ -0.29
CHD1-212ENST00000614616 RAI2Q9Y5P3 530 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 POM121CA8CG34 1229 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 NKRFO15226 690 aaKnown RBP eCLIP13.25□□□□□ -0.292e-6■■■■□ 24.3
CHD1-212ENST00000614616 RDH16O75452 317 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 SIX3O95343 332 aaPredicted RBP13.25□□□□□ -0.29
CHD1-212ENST00000614616 RPS17P08708 135 aaKnown RBP13.25□□□□□ -0.29
CHD1-212ENST00000614616 GM2AP17900 193 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 GGT1P19440 569 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 TAS2R50P59544 299 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 POU6F2P78424 691 aaPredicted RBP13.25□□□□□ -0.29
CHD1-212ENST00000614616 ELAVL2Q12926 359 aaKnown RBP13.25□□□□□ -0.29
CHD1-212ENST00000614616 GFOD2Q3B7J2 385 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 C1QTNF12Q5T7M4 302 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 FRG2Q64ET8 278 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 C2CD4AQ8NCU7 369 aaPredicted RBP13.25□□□□□ -0.29
CHD1-212ENST00000614616 C7orf57Q8NEG2 295 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 FRG2BQ96QU4 278 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 H3BRB1 525 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 LCKP06239 509 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 NCBP2P52298 156 aaKnown RBP eCLIP13.25□□□□□ -0.29
CHD1-212ENST00000614616 OR10K2Q6IF99 312 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 GPRC5AQ8NFJ5 357 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 OR2T11Q8NH01 316 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 GRIN3AQ8TCU5 1115 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 SORCS1Q8WY21 1168 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 ST6GALNAC4Q9H4F1 302 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 TUT1Q9H6E5 874 aaKnown RBP13.25□□□□□ -0.29
CHD1-212ENST00000614616 EMX1Q04741 257 aaPredicted RBP13.25□□□□□ -0.29
CHD1-212ENST00000614616 DNM1P34Q6PK57 102 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 NRARPQ7Z6K4 114 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 OR56B4Q8NH76 319 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 PRR11Q96HE9 360 aaPredicted RBP13.25□□□□□ -0.29
CHD1-212ENST00000614616 SLC5A7Q9GZV3 580 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 KCNH6Q9H252 994 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 LCHNA4D1U4 455 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 B4GAT1O43505 415 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 TRAPPC2P0DI81 140 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 TRAPPC2BP0DI82 140 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 TOMM20Q15388 145 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 PDCD2LQ9BRP1 358 aa13.25□□□□□ -0.29
CHD1-212ENST00000614616 C5P01031 1676 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 LALBAP00709 142 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 BDKRB2P30411 391 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 DLX5P56178 289 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 HERV-K104P61576 105 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 BCL2A1Q16548 175 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 TIGD3Q6B0B8 471 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 CILP2Q8IUL8 1156 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 IGDCC3Q8IVU1 814 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 OR8J1Q8NGP2 316 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 KIAA1191Q96A73 305 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 CMTM7Q96FZ5 175 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 CYP2S1Q96SQ9 504 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 YIPF4Q9BSR8 244 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 NR2E3Q9Y5X4 410 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 TRPM6Q9BX84 2022 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 AHSGP02765 367 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 ALDOAP04075 364 aaKnown RBP13.24□□□□□ -0.29
CHD1-212ENST00000614616 INHAP05111 366 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 SLC35G4P0C7Q5 338 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 ACADMP11310 421 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 AQP2P41181 271 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 RASGRP3Q8IV61 690 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 BOLLQ8N9W6 283 aaKnown RBP13.24□□□□□ -0.29
CHD1-212ENST00000614616 POC1BQ8TC44 478 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 ACER1Q8TDN7 264 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 PCDHB11Q9Y5F2 797 aa13.24□□□□□ -0.29
CHD1-212ENST00000614616 RPS10-NUDT3A0A1W2PQS6 291 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms