RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 AMER3Q8N944 861 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 TTC29Q8NA56 475 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-212ENST00000613856 OR8J2Q8NGG1 315 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 N4BP2L2Q92802 583 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-212ENST00000613856 TM4SF18Q96CE8 201 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 ZNF501Q96CX3 271 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-212ENST00000613856 RCN3Q96D15 328 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 C10orf90Q96M02 699 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 NPLQ9BXD5 320 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-212ENST00000613856 LRMDAQ9H2I8 198 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 CLK4Q9HAZ1 481 aaKnown RBP10.81□□□□□ -0.68
SLIRP-212ENST00000613856 LYRM4Q9HD34 91 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 NDE1Q9NXR1 346 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 EHD3Q9NZN3 535 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 PHF11Q9UIL8 331 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 LEF1Q9UJU2 399 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-212ENST00000613856 EXO1Q9UQ84 846 aaKnown RBP10.81□□□□□ -0.68
SLIRP-212ENST00000613856 MRPS2Q9Y399 296 aaKnown RBP10.81□□□□□ -0.68
SLIRP-212ENST00000613856 ASB4Q9Y574 426 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 HEMK1Q9Y5R4 338 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-212ENST00000613856 FER1L5A0AVI2 2057 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 TLN1Q9Y490 2541 aaKnown RBP10.81□□□□□ -0.68
SLIRP-212ENST00000613856 NUP210LQ5VU65 1888 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 ASPDHA6ND91 283 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 A8MU76 341 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 TMEM150CB9EJG8 249 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 C9JVG2 144 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 MRASO14807 208 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 SUV39H1O43463 412 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 B3GALT2O43825 422 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 OR2B3O76000 313 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 LRATO95237 230 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 NSA2O95478 260 aaKnown RBP10.8□□□□□ -0.68
SLIRP-212ENST00000613856 CTSBP07858 339 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 COX7A2P14406 83 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 DRD2P14416 443 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 FOLR1P15328 257 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 DDCP20711 480 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 PTPN4P29074 926 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 RBMS1P29558 406 aaKnown RBP10.8□□□□□ -0.68
SLIRP-212ENST00000613856 CCKBRP32239 447 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 S100A3P33764 101 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 KIR3DL1P43629 444 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 CPA2P48052 419 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 HNRNPFP52597 415 aaKnown RBP10.8□□□□□ -0.68
SLIRP-212ENST00000613856 HNRNPH2P55795 449 aaKnown RBP10.8□□□□□ -0.68
SLIRP-212ENST00000613856 ITGA1P56199 1179 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 SNRPNP63162 240 aaKnown RBP10.8□□□□□ -0.68
SLIRP-212ENST00000613856 C2orf80Q0P641 193 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 LRRC74AQ0VAA2 488 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 SLAMF1Q13291 335 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 TLR1Q15399 786 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 GPR19Q15760 415 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 MUM1Q2TAK8 710 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 VPS26BQ4G0F5 336 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 DEFB134Q4QY38 66 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 TLDC1Q6P9B6 456 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 CYB5D1Q6P9G0 228 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 RBM44Q6ZP01 1051 aaKnown RBP10.8□□□□□ -0.68
SLIRP-212ENST00000613856 ASRGL1Q7L266 308 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 B3GNT8Q7Z7M8 397 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 RETREG3Q86VR2 466 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 PDSS2Q86YH6 399 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 NATD1Q8N6N6 113 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 PCYOX1LQ8NBM8 494 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 RBM15BQ8NDT2 890 aaKnown RBP10.8□□□□□ -0.68
SLIRP-212ENST00000613856 OR1L3Q8NH93 324 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 CDC26Q8NHZ8 85 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 ROPN1LQ96C74 230 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 COQ8BQ96D53 544 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 MVB12AQ96EY5 273 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 PRPF18Q99633 342 aaKnown RBP10.8□□□□□ -0.68
SLIRP-212ENST00000613856 FAIM2Q9BWQ8 316 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 BHLHE41Q9C0J9 482 aaPredicted RBP10.8□□□□□ -0.68
SLIRP-212ENST00000613856 EFCAB1Q9HAE3 211 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 ANKHQ9HCJ1 492 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 FGF21Q9NSA1 209 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 ATAD3AQ9NVI7 634 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.8□□□□□ -0.68
SLIRP-212ENST00000613856 FAM120CQ9NX05 1096 aaKnown RBP10.8□□□□□ -0.68
SLIRP-212ENST00000613856 MS4A12Q9NXJ0 267 aa10.8□□□□□ -0.68
SLIRP-212ENST00000613856 SPENQ96T58 3664 aaKnown RBP10.8□□□□□ -0.68
SLIRP-212ENST00000613856 UTP20O75691 2785 aaKnown RBP10.79□□□□□ -0.68
SLIRP-212ENST00000613856 HYKKA2RU49 373 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 GABRR3A8MPY1 467 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 B2RBV5 119 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 TMX2-CTNND1H3BSU7 103 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 AKAP10O43572 662 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 NPPAP01160 153 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 KRT16P08779 473 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 PIM1P11309 404 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-212ENST00000613856 IL1RNP18510 177 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 CPOXP36551 454 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 NUDT2P50583 147 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 DGKQP52824 942 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 TNFRSF17Q02223 184 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 TLE1Q04724 770 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 FOXM1Q08050 763 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 FAM214AQ32MH5 1076 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 MMEL1Q495T6 779 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms