RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 NCF4Q15080 339 aa13.85□□□□□ -0.19
CD48-203ENST00000613788 MINDY4Q4G0A6 757 aa13.85□□□□□ -0.19
CD48-203ENST00000613788 MFSD4BQ5TF39 518 aa13.85□□□□□ -0.19
CD48-203ENST00000613788 OR52E8Q6IFG1 317 aa13.85□□□□□ -0.19
CD48-203ENST00000613788 SLC48A1Q6P1K1 146 aa13.85□□□□□ -0.19
CD48-203ENST00000613788 FAM198BQ6UWH4 519 aa13.85□□□□□ -0.19
CD48-203ENST00000613788 RIPOR1Q6ZS17 1223 aa13.85□□□□□ -0.19
CD48-203ENST00000613788 ZC3H7AQ8IWR0 971 aaKnown RBP13.85□□□□□ -0.19
CD48-203ENST00000613788 IL22RA1Q8N6P7 574 aa13.85□□□□□ -0.19
CD48-203ENST00000613788 GLB1L3Q8NCI6 653 aaPredicted RBP13.85□□□□□ -0.19
CD48-203ENST00000613788 CT55Q8WUE5 264 aa13.85□□□□□ -0.19
CD48-203ENST00000613788 NKD1Q969G9 470 aa13.85□□□□□ -0.19
CD48-203ENST00000613788 CSF3RQ99062 836 aa13.85□□□□□ -0.19
CD48-203ENST00000613788 GPR87Q9BY21 358 aa13.85□□□□□ -0.19
CD48-203ENST00000613788 RBCK1Q9BYM8 510 aa13.85□□□□□ -0.19
CD48-203ENST00000613788 PRTFDC1Q9NRG1 225 aa13.85□□□□□ -0.19
CD48-203ENST00000613788 PADI2Q9Y2J8 665 aa13.85□□□□□ -0.19
CD48-203ENST00000613788 MMACHCQ9Y4U1 282 aa13.85□□□□□ -0.19
CD48-203ENST00000613788 GLOD5A6NK44 160 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 ANKRD28O15084 1053 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 SCAMP2O15127 329 aaKnown RBP13.84□□□□□ -0.19
CD48-203ENST00000613788 PGRMC2O15173 223 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 TBX19O60806 448 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 JRKO75564 520 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 DCTN3O75935 186 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 FURINP09958 794 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 GPX3P22352 226 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 ADSLP30566 484 aaPredicted RBP13.84□□□□□ -0.19
CD48-203ENST00000613788 NME5P56597 212 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 UFM1P61960 85 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 SLC13A2Q13183 592 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 BIKQ13323 160 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 MTDHQ86UE4 582 aaKnown RBP13.84□□□□□ -0.19
CD48-203ENST00000613788 TICAM1Q8IUC6 712 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 RIMKLAQ8IXN7 391 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 SAMD14Q8IZD0 417 aaPredicted RBP13.84□□□□□ -0.19
CD48-203ENST00000613788 KRTCAP2Q8N6L1 136 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 NATD1Q8N6N6 113 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 OR4K14Q8NGD5 310 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 DNAJB14Q8TBM8 379 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 PPCDCQ96CD2 204 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 ZNF764Q96H86 408 aaPredicted RBP13.84□□□□□ -0.19
CD48-203ENST00000613788 ACTL8Q9H568 366 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 ZNF385DQ9H6B1 395 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 SAR1AQ9NR31 198 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 LANCL2Q9NS86 450 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 ATAD3AQ9NVI7 634 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 TAS2R7Q9NYW3 318 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 SH3BP4Q9P0V3 963 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 ATP6V1HQ9UI12 483 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 KCND3Q9UK17 655 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 MKL2Q9ULH7 1088 aa13.84□□□□□ -0.19
CD48-203ENST00000613788 FARSAQ9Y285 508 aaKnown RBP13.84□□□□□ -0.19
CD48-203ENST00000613788 SYNDIG1LA6NDD5 238 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 GABRR3A8MPY1 467 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 PRKRAO75569 313 aaKnown RBP13.83□□□□□ -0.2
CD48-203ENST00000613788 CDC123O75794 336 aaPredicted RBP13.83□□□□□ -0.2
CD48-203ENST00000613788 HEXBP07686 556 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 CYC1P08574 325 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 COX7A2P14406 83 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 PIK3R1P27986 724 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 DLSTP36957 453 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 SRSF11Q05519 484 aaKnown RBP13.83□□□□□ -0.2
CD48-203ENST00000613788 PDE7AQ13946 482 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 DPY19L1Q2PZI1 675 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 CPTPQ5TA50 214 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 QSOX2Q6ZRP7 698 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 LAPTM4BQ86VI4 370 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 PRSS58Q8IYP2 241 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 SHISA5Q8N114 240 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 MMP21Q8N119 569 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 ENDOVQ8N8Q3 282 aaKnown RBP13.83□□□□□ -0.2
CD48-203ENST00000613788 TMEM52Q8NDY8 209 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 FGF11Q92914 225 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 KIAA1143Q96AT1 154 aaPredicted RBP13.83□□□□□ -0.2
CD48-203ENST00000613788 TESCQ96BS2 214 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 PTCHD1Q96NR3 888 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 SPSB2Q99619 263 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 NMUR2Q9GZQ4 415 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 CLMPQ9H6B4 373 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 SOX17Q9H6I2 414 aaPredicted RBP13.83□□□□□ -0.2
CD48-203ENST00000613788 GIMAP4Q9NUV9 329 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 CROTQ9UKG9 612 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 UTS2RQ9UKP6 389 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 ANGPTL2Q9UKU9 493 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 CES1P1Q9UKY3 287 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 EXO1Q9UQ84 846 aaKnown RBP13.83□□□□□ -0.2
CD48-203ENST00000613788 PTRH2Q9Y3E5 179 aaKnown RBP13.83□□□□□ -0.2
CD48-203ENST00000613788 ZNF780BQ9Y6R6 833 aa13.83□□□□□ -0.2
CD48-203ENST00000613788 SEC16AO15027 2179 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 FAM234BA2RU67 622 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 FCHO1O14526 889 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 SLC22A2O15244 555 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 ERAL1O75616 437 aaKnown RBP13.82□□□□□ -0.2
CD48-203ENST00000613788 GPR75O95800 540 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 HNRNPFP52597 415 aaKnown RBP13.82□□□□□ -0.2
CD48-203ENST00000613788 EMP2P54851 167 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 PCBP4P57723 403 aaKnown RBP13.82□□□□□ -0.2
CD48-203ENST00000613788 BTG2P78543 158 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 STX4Q12846 297 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms