RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 CDK10Q15131 360 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 TMEM35AQ53FP2 167 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 ZNF805Q5CZA5 627 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 MAPK15Q8TD08 544 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 SRRDQ9UH36 339 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 KLHL21Q9UJP4 597 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 PARP4Q9UKK3 1724 aaKnown RBP16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 LEFTY2O00292 366 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 PABPC4LP0CB38 370 aaKnown RBP16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 RHCEP18577 417 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 C6orf141Q5SZD1 244 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 NAPRTQ6XQN6 538 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 SAMD11Q96NU1 681 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 MED1Q15648 1581 aaPredicted RBP16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 C1orf226A1L170 272 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 A8MUA0 341 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 JUPP14923 745 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 TCEA1P23193 301 aaKnown RBP16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 STEAP4Q687X5 459 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 OR4E2Q8NGC2 313 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 NINJ1Q92982 152 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 IRF7Q92985 503 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 AP1S3Q96PC3 154 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 KCNN3Q9UGI6 736 aa16.74■□□□□ 0.27
HMGXB3-206ENST00000613459 LMO7Q8WWI1 1683 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 DENRO43583 198 aaKnown RBP16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 KCNJ13O60928 360 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 APBB3O95704 486 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 CH25HO95992 272 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 FHP07954 510 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 S100PP25815 95 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 GDF5P43026 501 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 KCNC1P48547 511 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 PEBP4Q96S96 227 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 POTEKPQ9BYX7 375 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 RNF39Q9H2S5 420 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 TLR9Q9NR96 1032 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 SOX14O95416 240 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 ZNF14P17017 642 aaPredicted RBP16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 ACRV1P26436 265 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 SLC11A1P49279 550 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 ST3GAL4Q11206 333 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 C11orf91Q3C1V1 193 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 C2orf27AQ580R0 203 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 POGLUT1Q8NBL1 392 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 TMEM41AQ96HV5 264 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 SIX4Q9UIU6 781 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 FBP2O00757 339 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 TSPAN6O43657 245 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 RAB5BP61020 215 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 SEMG2Q02383 582 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 UGT8Q16880 541 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 ANKRD13BQ86YJ7 626 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 MAELQ96JY0 434 aaKnown RBP16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 SLC5A7Q9GZV3 580 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 HYKKA2RU49 373 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 SLC22A31A6NKX4 558 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 M0R129 80 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 HSPA12AO43301 675 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 RBBP9O75884 186 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 HOXB2P14652 356 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 MRPL49Q13405 166 aaKnown RBP16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 ARSKQ6UWY0 536 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 CMTM8Q8IZV2 173 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 SCML4Q8N228 414 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 ZNF709Q8N972 641 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 RPLP0P6Q8NHW5 317 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 THAP4Q8WY91 577 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 MSANTD3Q96H12 275 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 BMFQ96LC9 184 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 MUS81Q96NY9 551 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 ZNF395Q9H8N7 513 aaPredicted RBP16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 KCTD3Q9Y597 815 aa16.73■□□□□ 0.27
HMGXB3-206ENST00000613459 BLOC1S5-TXNDC5H3BN57 136 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 PORP16435 677 aaPredicted RBP16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 ZNF84P51523 738 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 SCAPQ12770 1279 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 ASPGQ86U10 573 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 TCEAL3Q969E4 200 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 FAM221BA6H8Z2 402 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 AGAP5A6NIR3 686 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 INPPL1O15357 1258 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 HLCSP50747 726 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 RAB8AP61006 207 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 KCNAB2Q13303 367 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 FLYWCH1Q4VC44 716 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 ASB12Q8WXK4 309 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 OR2M4Q96R27 311 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 URM1Q9BTM9 101 aaKnown RBP16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 OR10A4Q9H209 315 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 NELFAQ9H3P2 528 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 PRTFDC1Q9NRG1 225 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 RNF13O43567 381 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 DNAJB6O75190 326 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 FRKP42685 505 aaPredicted RBP16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 CLRN1P58418 232 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 PLP2Q04941 152 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 ARHGAP12Q8IWW6 846 aa16.72■□□□□ 0.27
HMGXB3-206ENST00000613459 HS3ST5Q8IZT8 346 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms