RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 TUBA1BP68363 451 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 FCHO2Q0JRZ9 810 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 KRR1Q13601 381 aaKnown RBP15.74■□□□□ 0.11
CNOT3-208ENST00000613073 PON2Q15165 354 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 ZMAT1Q5H9K5 638 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 ARMC4Q5T2S8 1044 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 LRIF1Q5T3J3 769 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 PARM1Q6UWI2 310 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 Q6ZPB1 254 aaPredicted RBP15.74■□□□□ 0.11
CNOT3-208ENST00000613073 ZNF621Q6ZSS3 439 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 TUBA1AQ71U36 451 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 C11orf96Q7Z7L8 435 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 NOXA1Q86UR1 476 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 RAB43Q86YS6 212 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 FAM9CQ8IZT9 166 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 DTX3Q8N9I9 347 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 OR9A1PQ8NGU1 263 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 NETO1Q8TDF5 533 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 UBASH3BQ8TF42 649 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 FGF14Q92915 247 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 MYADMQ96S97 322 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 ROGDIQ9GZN7 287 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 GORASP2Q9H8Y8 452 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 SERGEFQ9UGK8 458 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 KLHL20Q9Y2M5 609 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 STON1Q9Y6Q2 735 aa15.74■□□□□ 0.11
CNOT3-208ENST00000613073 GOLGA4Q13439 2230 aaKnown RBP15.73■□□□□ 0.11
CNOT3-208ENST00000613073 MEIOCA2RUB1 952 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 FPGTO14772 594 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 YY2O15391 372 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 LAMP1P11279 417 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 DDOSTP39656 456 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 CRISP3P54108 245 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 PRKCDQ05655 676 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 GPR50Q13585 617 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 SLBPQ14493 270 aaKnown RBP eCLIP15.73■□□□□ 0.11
CNOT3-208ENST00000613073 YIF1BQ5BJH7 314 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 SYCE2Q6PIF2 218 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 ZNF551Q7Z340 670 aaPredicted RBP15.73■□□□□ 0.11
CNOT3-208ENST00000613073 OR5AR1Q8NGP9 310 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 OR2L2Q8NH16 312 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 GRPEL2Q8TAA5 225 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 RASSF5Q8WWW0 418 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 CCDC115Q96NT0 180 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 SLA2Q9H6Q3 261 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 NARFLQ9H6Q4 476 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 TRPV4Q9HBA0 871 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 RABL2AQ9UBK7 228 aaPredicted RBP15.73■□□□□ 0.11
CNOT3-208ENST00000613073 RUVBL1Q9Y265 456 aaKnown RBP15.73■□□□□ 0.11
CNOT3-208ENST00000613073 MAN2B2Q9Y2E5 1009 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 GNG14A0A1W2PPG7 69 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 SERTM1A2A2V5 107 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 ANXA4P09525 319 aaPredicted RBP15.73■□□□□ 0.11
CNOT3-208ENST00000613073 JUNDP17535 347 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 DAPP51397 102 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 NUDT6P53370 316 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 RAE1P78406 368 aaKnown RBP15.73■□□□□ 0.11
CNOT3-208ENST00000613073 TAP2Q03519 686 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 FADDQ13158 208 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 MED27Q6P2C8 311 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 GALNT10Q86SR1 603 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 TTC29Q8NA56 475 aaPredicted RBP15.73■□□□□ 0.11
CNOT3-208ENST00000613073 CHAC2Q8WUX2 184 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 HDAC8Q9BY41 377 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 ZDHHC5Q9C0B5 715 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 SPNS1Q9H2V7 528 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 ANKHQ9HCJ1 492 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 OR1A2Q9Y585 309 aa15.73■□□□□ 0.11
CNOT3-208ENST00000613073 COL4A3Q01955 1670 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 MGAT4DA6NG13 374 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 FAM25AB3EWG3 89 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 FAM25CB3EWG5 89 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 FAM25GB3EWG6 89 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 NPIPB8E9PQR5 432 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 CREG1O75629 220 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 TGFB1P01137 390 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 TAS2R38P59533 333 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 MAD2L1BPQ15013 274 aaPredicted RBP15.72■□□□□ 0.11
CNOT3-208ENST00000613073 ATG9BQ674R7 924 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 CCDC71Q8IV32 467 aaPredicted RBP15.72■□□□□ 0.11
CNOT3-208ENST00000613073 FAM109AQ8N4B1 249 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 ZNF740Q8NDX6 193 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 DNASE1L2Q92874 299 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 SH3KBP1Q96B97 665 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 COPS4Q9BT78 406 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 MKRN2Q9H000 416 aaKnown RBP15.72■□□□□ 0.11
CNOT3-208ENST00000613073 OBP2AQ9NY56 170 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 DYRK1BQ9Y463 629 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 A0A1W2PP55 124 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 CAPN5O15484 640 aaPredicted RBP15.72■□□□□ 0.11
CNOT3-208ENST00000613073 ZNF682O95780 498 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 YES1P07947 543 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 UQCRC1P31930 480 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 MAPK9P45984 424 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 WNT3P56703 355 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 WSCD2Q2TBF2 565 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 IER5LQ5T953 404 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 PXDC1Q5TGL8 231 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 HORMAD1Q86X24 394 aa15.72■□□□□ 0.11
CNOT3-208ENST00000613073 FBLIM1Q8WUP2 373 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms