RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 ADORA2AP29274 412 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 PSEN2P49810 448 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 ERVFC1P60507 584 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 ELOA3BQ3SY89 546 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 SLC30A7Q8NEW0 376 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 ELOA3Q8NG57 546 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 CMTM7Q96FZ5 175 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 ZNF599Q96NL3 588 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 NKX6-2Q9C056 277 aaPredicted RBP8.45□□□□□ -1.06
TTC28-208ENST00000612946 COQ4Q9Y3A0 265 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 LACTBL1A8MY62 500 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 MATN3O15232 486 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 ENGP17813 658 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 L1CAMP32004 1257 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 ADRA1BP35368 520 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 WNT4P56705 351 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 FAM162BQ5T6X4 162 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 ABLIM2Q6H8Q1 611 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 ZER1Q7Z7L7 766 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 XYLT1Q86Y38 959 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 PPP1R13LQ8WUF5 828 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 ANKRD31Q8N7Z5 1873 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 RHOQP17081 205 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 S1PR1P21453 382 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 COQ8BQ96D53 544 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 ELF4Q99607 663 aaPredicted RBP8.45□□□□□ -1.06
TTC28-208ENST00000612946 GPR21Q99679 349 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 SCPEP1Q9HB40 452 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 FKBPLQ9UIM3 349 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 GMEB2Q9UKD1 530 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 RNF215Q9Y6U7 377 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 A8MT66 165 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 AOC2O75106 756 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 TOXO94900 526 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 CSF3P09919 207 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 SLC35G4P0C7Q5 338 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 IMPA1P29218 277 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 SNCAP37840 140 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 GIPRP48546 466 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 RPIAP49247 311 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 CDK6Q00534 326 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 RBMS2Q15434 407 aaKnown RBP8.45□□□□□ -1.06
TTC28-208ENST00000612946 KDELC1Q6UW63 502 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 CNIH3Q8TBE1 160 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 XAGE5Q8WWM1 108 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 HSD17B14Q9BPX1 270 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 URM1Q9BTM9 101 aaKnown RBP8.45□□□□□ -1.06
TTC28-208ENST00000612946 GSKIPQ9P0R6 139 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 SLC6A5Q9Y345 797 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 KCNK2O95069 426 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 BATFQ16520 125 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 DCAF12L1Q5VU92 463 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.45□□□□□ -1.06
TTC28-208ENST00000612946 TIPARPQ7Z3E1 657 aaKnown RBP8.45□□□□□ -1.06
TTC28-208ENST00000612946 TEX19Q8NA77 164 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 OR2A12Q8NGT7 310 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 NTAN1Q96AB6 310 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 DIRAS1O95057 198 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 RAB40ALP0C0E4 278 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 FGF3P11487 239 aaPredicted RBP8.45□□□□□ -1.06
TTC28-208ENST00000612946 SLC26A5P58743 744 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 RPP30P78346 268 aaKnown RBP8.45□□□□□ -1.06
TTC28-208ENST00000612946 GPR33Q49SQ1 333 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 NANOGP8Q6NSW7 305 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 C1orf87Q8N0U7 546 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 NXPE1Q8N323 547 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 ZNF366Q8N895 744 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 ZFP90Q8TF47 636 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 RAB40AQ8WXH6 277 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 NANOGQ9H9S0 305 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 ZBTB20Q9HC78 741 aaPredicted RBP8.45□□□□□ -1.06
TTC28-208ENST00000612946 DZANK1Q9NVP4 752 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 A0A1W2PRB8 838 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 CKMP06732 381 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 SPI1P17947 270 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 SRPXP78539 464 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 C16orf59Q7L2K0 433 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 FRS2Q8WU20 508 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 THAP7Q9BT49 309 aaPredicted RBP8.45□□□□□ -1.06
TTC28-208ENST00000612946 KLK4Q9Y5K2 254 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 PRSS51A0A1B0GVH4 220 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 TCRBV3S1A0A5B6 114 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 OR8U9P0C7N5 309 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 UNGP13051 313 aaPredicted RBP8.45□□□□□ -1.06
TTC28-208ENST00000612946 CREB1P16220 341 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 SLC39A4Q6P5W5 647 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 KCTD20Q7Z5Y7 419 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 SYNE4Q8N205 404 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 RAB3CQ96E17 227 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 HIST1H2AAQ96QV6 131 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 ZNF251Q9BRH9 671 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 SLCO5A1Q9H2Y9 848 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 HMX1Q9NP08 348 aaPredicted RBP8.45□□□□□ -1.06
TTC28-208ENST00000612946 UBR1Q8IWV7 1749 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 FAM86B1E9PN63 330 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 DLX3O60479 287 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 HLA-HP01893 362 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 NIPAL3Q6P499 406 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 MBOAT1Q6ZNC8 495 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 CEACAM19Q7Z692 300 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms