RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 TEX261Q6UWH6 196 aa10.54□□□□□ -0.72
CDH4-202ENST00000611855 CFAP77Q6ZQR2 320 aa10.54□□□□□ -0.72
CDH4-202ENST00000611855 HMGN2P46Q86SG4 172 aa10.54□□□□□ -0.72
CDH4-202ENST00000611855 PDZD3Q86UT5 571 aa10.54□□□□□ -0.72
CDH4-202ENST00000611855 MEX3DQ86XN8 651 aaKnown RBP10.54□□□□□ -0.72
CDH4-202ENST00000611855 C9orf62Q8N4C0 152 aa10.54□□□□□ -0.72
CDH4-202ENST00000611855 IQCF1Q8N6M8 205 aa10.54□□□□□ -0.72
CDH4-202ENST00000611855 C11orf65Q8NCR3 313 aa10.54□□□□□ -0.72
CDH4-202ENST00000611855 C9orf43Q8TAL5 461 aaPredicted RBP10.54□□□□□ -0.72
CDH4-202ENST00000611855 CEP76Q8TAP6 659 aa10.54□□□□□ -0.72
CDH4-202ENST00000611855 CIDECQ96AQ7 238 aaPredicted RBP10.54□□□□□ -0.72
CDH4-202ENST00000611855 HIST1H2AHQ96KK5 128 aa10.54□□□□□ -0.72
CDH4-202ENST00000611855 RAD9AQ99638 391 aa10.54□□□□□ -0.72
CDH4-202ENST00000611855 HIST1H2AJQ99878 128 aa10.54□□□□□ -0.72
CDH4-202ENST00000611855 H2AFJQ9BTM1 129 aa10.54□□□□□ -0.72
CDH4-202ENST00000611855 ERVMER34-1Q9H9K5 563 aa10.54□□□□□ -0.72
CDH4-202ENST00000611855 PAK6Q9NQU5 681 aaPredicted RBP10.54□□□□□ -0.72
CDH4-202ENST00000611855 POFUT2Q9Y2G5 429 aa10.54□□□□□ -0.72
CDH4-202ENST00000611855 U3KQ87 197 aa10.54□□□□□ -0.72
CDH4-202ENST00000611855 MTMR11A4FU01 709 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 TMEM88BA6NKF7 163 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 H7C0S8 307 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 TPST2O60704 377 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 CSO75390 466 aaKnown RBP10.53□□□□□ -0.72
CDH4-202ENST00000611855 ANXA4P09525 319 aaPredicted RBP10.53□□□□□ -0.72
CDH4-202ENST00000611855 CD9P21926 228 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 SOAT1P35610 550 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 ATN1P54259 1190 aaPredicted RBP10.53□□□□□ -0.72
CDH4-202ENST00000611855 SELENOWP63302 87 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 ABATP80404 500 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 CLLU1OSQ5K130 101 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 BCL2L15Q5TBC7 163 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 KIAA1841Q6NSI8 718 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 CNIH2Q6PI25 160 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 PRSS55Q6UWB4 352 aaPredicted RBP10.53□□□□□ -0.72
CDH4-202ENST00000611855 GLB1LQ6UWU2 654 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 CERS6Q6ZMG9 384 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 TRIM69Q86WT6 500 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 HS6ST3Q8IZP7 471 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 GDPD1Q8N9F7 314 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 GPR26Q8NDV2 337 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 METTL2AQ96IZ6 378 aaKnown RBP10.53□□□□□ -0.72
CDH4-202ENST00000611855 FAM193BQ96PV7 902 aaPredicted RBP10.53□□□□□ -0.72
CDH4-202ENST00000611855 FERD3LQ96RJ6 166 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 MED28Q9H204 178 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 GPATCH2Q9NW75 528 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 ING4Q9UNL4 249 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 KCNE1BA0A087WTH5 132 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 ZNF670-ZNF695F2Z2N8 137 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 HPGDSO60760 199 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 TBL1XO60907 577 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 CRYBB2P43320 205 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 LIMK1P53667 647 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 RPS26P62854 115 aaKnown RBP10.53□□□□□ -0.72
CDH4-202ENST00000611855 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.53□□□□□ -0.72
CDH4-202ENST00000611855 MFSD13AQ14CX5 517 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 EIF4HQ15056 248 aaKnown RBP10.53□□□□□ -0.72
CDH4-202ENST00000611855 RNASE12Q5GAN4 147 aaKnown RBP10.53□□□□□ -0.72
CDH4-202ENST00000611855 CXorf57Q6NSI4 855 aaKnown RBP10.53□□□□□ -0.72
CDH4-202ENST00000611855 BRAT1Q6PJG6 821 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 KIAA1324Q6UXG2 1013 aaKnown RBP10.53□□□□□ -0.72
CDH4-202ENST00000611855 USP30Q70CQ3 517 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 KIF18BQ86Y91 864 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 LRRC17Q8N6Y2 441 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 DENND6BQ8NEG7 585 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 DNAJB8Q8NHS0 232 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 FBXW5Q969U6 566 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 ANKRA2Q9H9E1 313 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 RBFOX1Q9NWB1 397 aaKnown RBP10.53□□□□□ -0.72
CDH4-202ENST00000611855 SPIN1Q9Y657 262 aaPredicted RBP10.53□□□□□ -0.72
CDH4-202ENST00000611855 C2orf78A6NCI8 922 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 E7EQ34 232 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 GTPBP1O00178 669 aaKnown RBP10.53□□□□□ -0.72
CDH4-202ENST00000611855 ZNF623O75123 536 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 CLDN11O75508 207 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 NCR1O76036 304 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 OAZ2O95190 189 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 GADD45GO95257 159 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 C6orf47O95873 294 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 ALDH1A1P00352 501 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 HRGP04196 525 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 AVPR1BP47901 424 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 PTPN5P54829 565 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 SRSF11Q05519 484 aaKnown RBP10.53□□□□□ -0.72
CDH4-202ENST00000611855 MTAPQ13126 283 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 MAP2K5Q13163 448 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 AANATQ16613 207 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 ATP13A5Q4VNC0 1218 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 CRTC2Q53ET0 693 aaPredicted RBP10.53□□□□□ -0.72
CDH4-202ENST00000611855 IFI44LQ53G44 452 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 ZNF385BQ569K4 471 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 FRMPD2BQ6IN97 320 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 B3GLCTQ6Y288 498 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 TMEM145Q8NBT3 493 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 CREB3L4Q8TEY5 395 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 SAMD11Q96NU1 681 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 CLEC4MQ9H2X3 399 aaPredicted RBP10.53□□□□□ -0.72
CDH4-202ENST00000611855 BEX1Q9HBH7 125 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 VPS29Q9UBQ0 182 aa10.53□□□□□ -0.72
CDH4-202ENST00000611855 SEC14L4Q9UDX3 406 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms