RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 SELPP16109 830 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 ZNF763Q0D2J5 394 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 SYCE2Q6PIF2 218 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 UBQLNLQ8IYU4 475 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 DENND6BQ8NEG7 585 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 CHAC2Q8WUX2 184 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 TMEM169Q96HH4 297 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 POLR2J3Q9H1A7 115 aaKnown RBP19.46■□□□□ 0.71
SSBP3-216ENST00000610401 CXorf36Q9H7Y0 433 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 TMEM39AQ9NV64 488 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.45■□□□□ 0.7
SSBP3-216ENST00000610401 FEZF1A0PJY2 475 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 SEMA7AO75326 666 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 TNFRSF21O75509 655 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 PRKRAO75569 313 aaKnown RBP19.45■□□□□ 0.7
SSBP3-216ENST00000610401 EPHB3P54753 998 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 MTA1Q13330 715 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 Q5BKY6 102 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 TRIM40Q6P9F5 258 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 HORMAD2Q8N7B1 307 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 RSPO3Q9BXY4 272 aaPredicted RBP19.45■□□□□ 0.7
SSBP3-216ENST00000610401 MRPL17Q9NRX2 175 aaKnown RBP19.45■□□□□ 0.7
SSBP3-216ENST00000610401 SEMA3GQ9NS98 782 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 HCFC1R1Q9NWW0 138 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 NOTOA8MTQ0 251 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 K7ESM1 405 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 PPM1DO15297 605 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 SOCS5O75159 536 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 PSKH1P11801 424 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 XKP51811 444 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 MANFP55145 182 aaKnown RBP19.45■□□□□ 0.7
SSBP3-216ENST00000610401 FAM26DQ5JW98 314 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 LHFPL3Q86UP9 236 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 GHDCQ8N2G8 530 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.45■□□□□ 0.7
SSBP3-216ENST00000610401 C16orf78Q8WTQ4 265 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 GEMIN6Q8WXD5 167 aaKnown RBP19.45■□□□□ 0.7
SSBP3-216ENST00000610401 ARSGQ96EG1 525 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 ST6GAL2Q96JF0 529 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 C11orf54Q9H0W9 315 aaPredicted RBP19.45■□□□□ 0.7
SSBP3-216ENST00000610401 OR2AG1Q9H205 316 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 ANKRA2Q9H9E1 313 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 C1GALT1Q9NS00 363 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 PLXNA3P51805 1871 aa19.45■□□□□ 0.7
SSBP3-216ENST00000610401 CCDC182A6NF36 153 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 KPNA3O00505 521 aaPredicted RBP19.44■□□□□ 0.7
SSBP3-216ENST00000610401 GREM1O60565 184 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 APEX1P27695 318 aaKnown RBP19.44■□□□□ 0.7
SSBP3-216ENST00000610401 AP1S2P56377 157 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 CSNK2BP67870 215 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 TBC1D17Q9HA65 648 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 ATXN8OSP0DMR3 200 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 CD79BP40259 229 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 ASMTP46597 345 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 RORCP51449 518 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 FBXO43Q4G163 708 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 MFSD4BQ5TF39 518 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 ERAP2Q6P179 960 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 ZNF367Q7RTV3 350 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 ADCK2Q7Z695 626 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 ATP6V1C2Q8NEY4 427 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 CRTC2Q53ET0 693 aaPredicted RBP19.44■□□□□ 0.7
SSBP3-216ENST00000610401 RNASE12Q5GAN4 147 aaKnown RBP19.44■□□□□ 0.7
SSBP3-216ENST00000610401 TUBA3EQ6PEY2 450 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 OR4D11Q8NGI4 311 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 CHTF18Q8WVB6 975 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 MRPS31Q92665 395 aaKnown RBP19.44■□□□□ 0.7
SSBP3-216ENST00000610401 TMEM19Q96HH6 336 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 IGSF21Q96ID5 467 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 CCDC59Q9P031 241 aaKnown RBP19.44■□□□□ 0.7
SSBP3-216ENST00000610401 CRNNQ9UBG3 495 aaPredicted RBP19.44■□□□□ 0.7
SSBP3-216ENST00000610401 ENPP4Q9Y6X5 453 aa19.44■□□□□ 0.7
SSBP3-216ENST00000610401 XCR1P46094 333 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 DSTNP60981 165 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 ZNF91Q05481 1191 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 TMEM115Q12893 351 aaPredicted RBP19.43■□□□□ 0.7
SSBP3-216ENST00000610401 FAM46DQ8NEK8 389 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 SLC38A5Q8WUX1 472 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 PIK3R3Q92569 461 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 FOPNLQ96NB1 174 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 F2RL3Q96RI0 385 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 RPRD1BQ9NQG5 326 aaKnown RBP19.43■□□□□ 0.7
SSBP3-216ENST00000610401 SSR3Q9UNL2 185 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 PRKYO43930 277 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 TIMM50Q3ZCQ8 353 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 DCST1Q5T197 706 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 GRHL2Q6ISB3 625 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 OR52N2Q8NGI0 321 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 SLC9A6Q92581 669 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 TP53INP1Q96A56 240 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 AP2M1Q96CW1 435 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 HDHD5Q9BXW7 423 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 PLCXD1Q9NUJ7 323 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 CLEC4AQ9UMR7 237 aa19.43■□□□□ 0.7
SSBP3-216ENST00000610401 MEN1O00255 615 aa19.42■□□□□ 0.7
SSBP3-216ENST00000610401 ITGA2P17301 1181 aa19.42■□□□□ 0.7
SSBP3-216ENST00000610401 RAB8AP61006 207 aa19.42■□□□□ 0.7
SSBP3-216ENST00000610401 ALDH6A1Q02252 535 aaKnown RBP19.42■□□□□ 0.7
SSBP3-216ENST00000610401 GDPD4Q6W3E5 623 aa19.42■□□□□ 0.7
SSBP3-216ENST00000610401 LINC00299Q6ZSB3 139 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms