RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 PPP1R16AQ96I34 528 aa3.21□□□□□ -1.9
HDDC2-207ENST00000608532 B3GALT6Q96L58 329 aa3.21□□□□□ -1.9
HDDC2-207ENST00000608532 RANBP9Q96S59 729 aa3.21□□□□□ -1.9
HDDC2-207ENST00000608532 C17orf62Q9BQA9 187 aa3.21□□□□□ -1.9
HDDC2-207ENST00000608532 TEX13BQ9BXU2 312 aa3.21□□□□□ -1.9
HDDC2-207ENST00000608532 CUEDC2Q9H467 287 aa3.21□□□□□ -1.9
HDDC2-207ENST00000608532 NT5DC2Q9H857 520 aa3.21□□□□□ -1.9
HDDC2-207ENST00000608532 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.21□□□□□ -1.9
HDDC2-207ENST00000608532 FAM212BQ9NTI7 297 aaPredicted RBP3.21□□□□□ -1.9
HDDC2-207ENST00000608532 PRO0461Q9UI25 63 aa3.21□□□□□ -1.9
HDDC2-207ENST00000608532 SRRM4A7MD48 611 aaKnown RBP3.2□□□□□ -1.9
HDDC2-207ENST00000608532 DUSP11O75319 330 aaKnown RBP3.2□□□□□ -1.9
HDDC2-207ENST00000608532 CSO75390 466 aaKnown RBP3.2□□□□□ -1.9
HDDC2-207ENST00000608532 OR6A2O95222 327 aa3.2□□□□□ -1.9
HDDC2-207ENST00000608532 FHP07954 510 aa3.2□□□□□ -1.9
HDDC2-207ENST00000608532 DRD3P35462 400 aa3.2□□□□□ -1.9
HDDC2-207ENST00000608532 KCNJ1P48048 391 aa3.2□□□□□ -1.9
HDDC2-207ENST00000608532 AKAP17AQ02040 695 aaKnown RBP3.2□□□□□ -1.9
HDDC2-207ENST00000608532 PSMD6Q15008 389 aa3.2□□□□□ -1.9
HDDC2-207ENST00000608532 CNPY1Q3B7I2 92 aa3.2□□□□□ -1.9
HDDC2-207ENST00000608532 UTF1Q5T230 341 aa3.2□□□□□ -1.9
HDDC2-207ENST00000608532 SIGLEC15Q6ZMC9 328 aa3.2□□□□□ -1.9
HDDC2-207ENST00000608532 HSCBQ8IWL3 235 aa3.2□□□□□ -1.9
HDDC2-207ENST00000608532 CYYR1Q96J86 154 aa3.2□□□□□ -1.9
HDDC2-207ENST00000608532 CDHR1Q96JP9 859 aa3.2□□□□□ -1.9
HDDC2-207ENST00000608532 GPR173Q9NS66 373 aa3.2□□□□□ -1.9
HDDC2-207ENST00000608532 CLIP2Q9UDT6 1046 aa3.2□□□□□ -1.9
HDDC2-207ENST00000608532 ZSCAN5CA6NGD5 496 aaPredicted RBP3.19□□□□□ -1.9
HDDC2-207ENST00000608532 IGHG3P01860 377 aa3.19□□□□□ -1.9
HDDC2-207ENST00000608532 ZBTB25P24278 435 aa3.19□□□□□ -1.9
HDDC2-207ENST00000608532 TFCP2Q12800 502 aa3.19□□□□□ -1.9
HDDC2-207ENST00000608532 IQCCQ4KMZ1 466 aa3.19□□□□□ -1.9
HDDC2-207ENST00000608532 PET117Q6UWS5 81 aa3.19□□□□□ -1.9
HDDC2-207ENST00000608532 FAM47EQ6ZV65 393 aa3.19□□□□□ -1.9
HDDC2-207ENST00000608532 PRR22Q8IZ63 422 aa3.19□□□□□ -1.9
HDDC2-207ENST00000608532 ZNF444Q8N0Y2 327 aaPredicted RBP3.19□□□□□ -1.9
HDDC2-207ENST00000608532 SLC22A18ASQ8N1D0 253 aa3.19□□□□□ -1.9
HDDC2-207ENST00000608532 SIX6OS1Q8N1H7 587 aa3.19□□□□□ -1.9
HDDC2-207ENST00000608532 PARP8Q8N3A8 854 aa3.19□□□□□ -1.9
HDDC2-207ENST00000608532 CCDC197Q8NCU1 140 aa3.19□□□□□ -1.9
HDDC2-207ENST00000608532 BEST4Q8NFU0 473 aa3.19□□□□□ -1.9
HDDC2-207ENST00000608532 ZBED6CLQ96FA7 236 aaPredicted RBP3.19□□□□□ -1.9
HDDC2-207ENST00000608532 NYAP2Q9P242 653 aa3.19□□□□□ -1.9
HDDC2-207ENST00000608532 GPR132Q9UNW8 380 aa3.19□□□□□ -1.9
HDDC2-207ENST00000608532 ATRXP46100 2492 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 MCF2LO15068 1137 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 ODC1P11926 461 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 IER3P46695 156 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 SCN1BQ07699 218 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 SLC3A1Q07837 685 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 SLC17A1Q14916 467 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 ZNF79Q15937 498 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 PODNL1Q6PEZ8 512 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 ABRAXAS1Q6UWZ7 409 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 ZNF600Q6ZNG1 722 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 TCP11Q8WWU5 503 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 ESAMQ96AP7 390 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 ERP27Q96DN0 273 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 ERO1AQ96HE7 468 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 LINC00167Q96N53 147 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 SERINC2Q96SA4 455 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 ZBP1Q9H171 429 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 ELL3Q9HB65 397 aaPredicted RBP3.18□□□□□ -1.9
HDDC2-207ENST00000608532 ZNF275Q9NSD4 429 aaPredicted RBP3.18□□□□□ -1.9
HDDC2-207ENST00000608532 PLEK2Q9NYT0 353 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 RCOR3Q9P2K3 495 aaPredicted RBP3.18□□□□□ -1.9
HDDC2-207ENST00000608532 Q9UF83 564 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 GIMAP2Q9UG22 337 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 IKZF3Q9UKT9 509 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 OR1A2Q9Y585 309 aa3.18□□□□□ -1.9
HDDC2-207ENST00000608532 IGKV6D-21A0A0A0MT36 114 aa3.17□□□□□ -1.9
HDDC2-207ENST00000608532 WDR46O15213 610 aaKnown RBP3.17□□□□□ -1.9
HDDC2-207ENST00000608532 KIAA0513O60268 411 aa3.17□□□□□ -1.9
HDDC2-207ENST00000608532 TBCAO75347 108 aaKnown RBP3.17□□□□□ -1.9
HDDC2-207ENST00000608532 RAD51DO75771 328 aa3.17□□□□□ -1.9
HDDC2-207ENST00000608532 SIX3O95343 332 aaPredicted RBP3.17□□□□□ -1.9
HDDC2-207ENST00000608532 GIG44P09565 113 aaPredicted RBP3.17□□□□□ -1.9
HDDC2-207ENST00000608532 HSD17B1P14061 328 aa3.17□□□□□ -1.9
HDDC2-207ENST00000608532 PPP2R1BP30154 601 aa3.17□□□□□ -1.9
HDDC2-207ENST00000608532 RPL27P61353 136 aaKnown RBP3.17□□□□□ -1.9
HDDC2-207ENST00000608532 PTK6Q13882 451 aa3.17□□□□□ -1.9
HDDC2-207ENST00000608532 TTC31Q49AM3 519 aaPredicted RBP3.17□□□□□ -1.9
HDDC2-207ENST00000608532 SNRNP48Q6IEG0 339 aaKnown RBP3.17□□□□□ -1.9
HDDC2-207ENST00000608532 CAPN13Q6MZZ7 669 aaPredicted RBP3.17□□□□□ -1.9
HDDC2-207ENST00000608532 AQP12AQ8IXF9 295 aa3.17□□□□□ -1.9
HDDC2-207ENST00000608532 NHLRC2Q8NBF2 726 aa3.17□□□□□ -1.9
HDDC2-207ENST00000608532 ICA1LQ8NDH6 482 aa3.17□□□□□ -1.9
HDDC2-207ENST00000608532 SPATA18Q8TC71 538 aa3.17□□□□□ -1.9
HDDC2-207ENST00000608532 TBCKQ8TEA7 893 aa3.17□□□□□ -1.9
HDDC2-207ENST00000608532 GANCQ8TET4 914 aa3.17□□□□□ -1.9
HDDC2-207ENST00000608532 GTSF1Q8WW33 167 aa3.17□□□□□ -1.9
HDDC2-207ENST00000608532 MRPL24Q96A35 216 aaKnown RBP3.17□□□□□ -1.9
HDDC2-207ENST00000608532 PCED1BQ96HM7 432 aa3.17□□□□□ -1.9
HDDC2-207ENST00000608532 ZNF559Q9BR84 538 aa3.17□□□□□ -1.9
HDDC2-207ENST00000608532 PDFQ9HBH1 243 aa3.17□□□□□ -1.9
HDDC2-207ENST00000608532 MRPL17Q9NRX2 175 aaKnown RBP3.17□□□□□ -1.9
HDDC2-207ENST00000608532 SLCO1C1Q9NYB5 712 aa3.17□□□□□ -1.9
HDDC2-207ENST00000608532 ANAPC11Q9NYG5 84 aa3.17□□□□□ -1.9
HDDC2-207ENST00000608532 TAS2R16Q9NYV7 291 aa3.17□□□□□ -1.9
HDDC2-207ENST00000608532 EIF3KQ9UBQ5 218 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms