RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 TMEM102Q8N9M5 508 aaPredicted RBP20.41■□□□□ 0.86
USP6NL-204ENST00000606752 PAPD5Q8NDF8 572 aaKnown RBP20.41■□□□□ 0.86
USP6NL-204ENST00000606752 PSMA8Q8TAA3 256 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 KLHL6Q8WZ60 621 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 FAM162AQ96A26 154 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 AMDHD1Q96NU7 426 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 BBS4Q96RK4 519 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 VCX3BQ9H321 246 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 RAD21L1Q9H4I0 556 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 LYRM4Q9HD34 91 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 STARD5Q9NSY2 213 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 MYO1GB0I1T2 1018 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 B4GAT1O43505 415 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 ERAL1O75616 437 aaKnown RBP20.4■□□□□ 0.86
USP6NL-204ENST00000606752 C9P02748 559 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 CPN2P22792 545 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 CRATP43155 626 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 TNFRSF17Q02223 184 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 HSPB3Q12988 150 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 FADDQ13158 208 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 LPCAT4Q643R3 524 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 PLXDC1Q8IUK5 500 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 CARFQ8N187 725 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 OR5AK3PQ8NH89 298 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 ZFP28Q8NHY6 868 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 NETO1Q8TDF5 533 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 LRTOMTQ8WZ04 291 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 POP5Q969H6 163 aaKnown RBP20.4■□□□□ 0.86
USP6NL-204ENST00000606752 NCLNQ969V3 563 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 GLIPR2Q9H4G4 154 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 EPS8L2Q9H6S3 715 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 CAPN10Q9HC96 672 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 PDE7BQ9NP56 450 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 PRDM9Q9NQV7 894 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 DCAF13Q9NV06 445 aaKnown RBP20.4■□□□□ 0.86
USP6NL-204ENST00000606752 ACSL6Q9UKU0 697 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 PLCL2Q9UPR0 1127 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 C15orf41Q9Y2V0 281 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 LRRC42Q9Y546 428 aa20.4■□□□□ 0.86
USP6NL-204ENST00000606752 DUX1O43812 170 aa20.39■□□□□ 0.86
USP6NL-204ENST00000606752 GALR3O60755 368 aaPredicted RBP20.39■□□□□ 0.86
USP6NL-204ENST00000606752 MYF5P13349 255 aa20.39■□□□□ 0.86
USP6NL-204ENST00000606752 TLX1P31314 330 aaPredicted RBP20.39■□□□□ 0.86
USP6NL-204ENST00000606752 MLLT3P42568 568 aaPredicted RBP20.39■□□□□ 0.86
USP6NL-204ENST00000606752 VEZF1Q14119 521 aa20.39■□□□□ 0.86
USP6NL-204ENST00000606752 PRTGQ2VWP7 1150 aa20.39■□□□□ 0.86
USP6NL-204ENST00000606752 ARHGEF39Q8N4T4 335 aa20.39■□□□□ 0.86
USP6NL-204ENST00000606752 ZBTB44Q8NCP5 570 aa20.39■□□□□ 0.86
USP6NL-204ENST00000606752 OR4C6Q8NH72 309 aa20.39■□□□□ 0.86
USP6NL-204ENST00000606752 CNRIP1Q96F85 164 aaPredicted RBP20.39■□□□□ 0.86
USP6NL-204ENST00000606752 DPH2Q9BQC3 489 aaPredicted RBP20.39■□□□□ 0.86
USP6NL-204ENST00000606752 GAREM1Q9H706 876 aa20.39■□□□□ 0.86
USP6NL-204ENST00000606752 SIRT3Q9NTG7 399 aaPredicted RBP20.39■□□□□ 0.86
USP6NL-204ENST00000606752 ENTPD4Q9Y227 616 aa20.39■□□□□ 0.86
USP6NL-204ENST00000606752 TMEM131Q92545 1883 aa20.39■□□□□ 0.85
USP6NL-204ENST00000606752 ARID1BQ8NFD5 2236 aaPredicted RBP20.39■□□□□ 0.85
USP6NL-204ENST00000606752 RNF103-CHMP3A0A140T963 221 aa20.39■□□□□ 0.85
USP6NL-204ENST00000606752 TIPRLO75663 272 aa20.39■□□□□ 0.85
USP6NL-204ENST00000606752 ZBTB11O95625 1053 aaPredicted RBP20.39■□□□□ 0.85
USP6NL-204ENST00000606752 SP9P0CG40 484 aa20.39■□□□□ 0.85
USP6NL-204ENST00000606752 CSNK2A2P19784 350 aaPredicted RBP20.39■□□□□ 0.85
USP6NL-204ENST00000606752 PEX2P28328 305 aa20.39■□□□□ 0.85
USP6NL-204ENST00000606752 GABRA4P48169 554 aa20.39■□□□□ 0.85
USP6NL-204ENST00000606752 NCBP2P52298 156 aaKnown RBP eCLIP20.39■□□□□ 0.853e-10■■■■■ 40.4
USP6NL-204ENST00000606752 AMZ1Q400G9 498 aa20.39■□□□□ 0.85
USP6NL-204ENST00000606752 COX20Q5RI15 118 aa20.39■□□□□ 0.85
USP6NL-204ENST00000606752 OGFRL1Q5TC84 451 aaPredicted RBP20.39■□□□□ 0.85
USP6NL-204ENST00000606752 PRSS41Q7RTY9 318 aa20.39■□□□□ 0.85
USP6NL-204ENST00000606752 Q8N9G6 341 aaPredicted RBP20.39■□□□□ 0.85
USP6NL-204ENST00000606752 OR6C4Q8NGE1 309 aa20.39■□□□□ 0.85
USP6NL-204ENST00000606752 FAM110BQ8TC76 370 aa20.39■□□□□ 0.85
USP6NL-204ENST00000606752 PPWD1Q96BP3 646 aaKnown RBP20.39■□□□□ 0.85
USP6NL-204ENST00000606752 NEURL3Q96EH8 262 aa20.39■□□□□ 0.85
USP6NL-204ENST00000606752 ZNF285Q96NJ3 590 aa20.39■□□□□ 0.85
USP6NL-204ENST00000606752 KLHL4Q9C0H6 718 aa20.39■□□□□ 0.85
USP6NL-204ENST00000606752 GIMAP4Q9NUV9 329 aa20.39■□□□□ 0.85
USP6NL-204ENST00000606752 DNAAF2Q9NVR5 837 aaKnown RBP20.39■□□□□ 0.85
USP6NL-204ENST00000606752 SOHLH2Q9NX45 425 aa20.39■□□□□ 0.85
USP6NL-204ENST00000606752 RAPGEFL1Q9UHV5 662 aa20.39■□□□□ 0.85
USP6NL-204ENST00000606752 FAF1Q9UNN5 650 aaPredicted RBP20.39■□□□□ 0.85
USP6NL-204ENST00000606752 NAALAD2Q9Y3Q0 740 aa20.39■□□□□ 0.85
USP6NL-204ENST00000606752 LAMA1P25391 3075 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 BDP1A6H8Y1 2624 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 PEX1O43933 1283 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 DNAJB6O75190 326 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 CTSBP07858 339 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 NUDT7P0C024 238 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 ETFAP13804 333 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 MPIP34949 423 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 CDK9P50750 372 aaKnown RBP20.38■□□□□ 0.85
USP6NL-204ENST00000606752 SPIDRQ14159 915 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 C16orf72Q14CZ0 275 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 CEBPEQ15744 281 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 LRRC36Q1X8D7 754 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 SAXO2Q658L1 398 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 ERMP1Q7Z2K6 904 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 RNF130Q86XS8 419 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 PDSS2Q86YH6 399 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 C10orf90Q96M02 699 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 SEPHS2Q99611 448 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms