RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	C17orf105	B2RV13	164 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	KDM4E	B2RXH2	506 aa	Predicted RBP	11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	TGFBR3L	H3BV60	316 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	IL18BP	O95998	194 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	SERPINA6	P08185	405 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	TMIGD3	P0DMS9	266 aa	Predicted RBP	11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	HNRNPF	P52597	415 aa	Known RBP	11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	REEP5	Q00765	189 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	DHX9	Q08211	1270 aa	Known RBP	11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	DHX34	Q14147	1143 aa	Known RBP	11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	RCAN2	Q14206	197 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	TOMM20	Q15388	145 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	ACKR1	Q16570	336 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	ZNF549	Q6P9A3	640 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	GSTA5	Q7RTV2	222 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	TMPRSS11B	Q86T26	416 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	LRRC25	Q8N386	305 aa	Predicted RBP	11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	LRRC57	Q8N9N7	239 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	SLC2A12	Q8TD20	617 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	EEF1AKMT1	Q8WVE0	214 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	NEIL2	Q969S2	332 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	GAL3ST3	Q96A11	431 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	TIMP4	Q99727	224 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	DOHH	Q9BU89	302 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	ALOXE3	Q9BYJ1	711 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	SPNS1	Q9H2V7	528 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	GALNT8	Q9NY28	637 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	CNIH4	Q9P003	139 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	MED16	Q9Y2X0	877 aa		11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	CHD3	Q12873	2000 aa	Known RBP	11.28	□□□□□ -0.6
NUP62-223	ENST00000601665	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	CD8B2	A6NJW9	211 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	BTNL10	A8MVZ5	291 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	HAX1	O00165	279 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	ERI3	O43414	337 aa	Known RBP	11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	DYRK3	O43781	588 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	ZNF354A	O60765	605 aa	Predicted RBP	11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	FTCD	O95954	541 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	SMIM10L1	P0DMW3	83 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	COX7A2	P14406	83 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	RPL21	P46778	160 aa	Known RBP	11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	TERF1	P54274	439 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	SARNP	P82979	210 aa	Known RBP	11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	CRYZ	Q08257	329 aa	Known RBP	11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	DMTN	Q08495	405 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	RUNX2	Q13950	521 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	EFTUD2	Q15029	972 aa	Known RBP eCLIP	11.27	□□□□□ -0.61	1e-16	■■■■■ 60.2
NUP62-223	ENST00000601665	MPEG1	Q2M385	716 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	C4orf22	Q6V702	233 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	C20orf204	Q6ZNR8	217 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	ZNF321P	Q8N8H1	164 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	ANKRD53	Q8N9V6	530 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	TMEM52	Q8NDY8	209 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	OR56A3	Q8NH54	315 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	PAQR8	Q8TEZ7	354 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	PTPMT1	Q8WUK0	201 aa	Predicted RBP	11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	ZNF669	Q96BR6	464 aa	Predicted RBP	11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	SPACA9	Q96E40	222 aa	Predicted RBP	11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	SMIM10	Q96HG1	83 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	ZNF597	Q96LX8	424 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	WDR83	Q9BRX9	315 aa	Known RBP	11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	PRDM14	Q9GZV8	571 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	COPS7B	Q9H9Q2	264 aa	Predicted RBP	11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	PELI2	Q9HAT8	420 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	PRM3	Q9NNZ6	103 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	JKAMP	Q9P055	326 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	VTI1B	Q9UEU0	232 aa		11.27	□□□□□ -0.61
NUP62-223	ENST00000601665	MBD3L3	A6NE82	208 aa	Predicted RBP	11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	LRRC3C	A6NJW4	275 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	C4orf51	C9J302	202 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	CTNS	O60931	367 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	GUCA1C	O95843	209 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	TP53	P04637	393 aa	Predicted RBP	11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	SERPINB3	P29508	390 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	HPD	P32754	393 aa	Predicted RBP	11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	GCK	P35557	465 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	CPOX	P36551	454 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	SLC1A2	P43004	574 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	MSH2	P43246	934 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	PLA2G16	P53816	162 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	DIO3	P55073	304 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	AP1S2	P56377	157 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	CDK16	Q00536	496 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	SERTAD2	Q14140	314 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	PIGG	Q5H8A4	983 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	SYDE1	Q6ZW31	735 aa	Predicted RBP	11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	KLHDC8A	Q8IYD2	350 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	DND1	Q8IYX4	353 aa	Known RBP	11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	CALML6	Q8TD86	181 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	LINGO1	Q96FE5	620 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	PIK3IP1	Q96FE7	263 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	OR4K3	Q96R72	315 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	SFXN3	Q9BWM7	321 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	RBSN	Q9H1K0	784 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	CALHM2	Q9HA72	323 aa		11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.26	□□□□□ -0.61
NUP62-223	ENST00000601665	ZNF226	Q9NYT6	803 aa		11.26	□□□□□ -0.61

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