RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 EFNA1P20827 205 aaPredicted RBP21.31■■□□□ 1
IRF3-228ENST00000601291 SLC6A2P23975 617 aa21.31■■□□□ 1
IRF3-228ENST00000601291 GCGRP47871 477 aa21.31■■□□□ 1
IRF3-228ENST00000601291 COL9A2Q14055 689 aaPredicted RBP21.31■■□□□ 1
IRF3-228ENST00000601291 PRSS53Q2L4Q9 553 aa21.31■■□□□ 1
IRF3-228ENST00000601291 NANOGP8Q6NSW7 305 aa21.31■■□□□ 1
IRF3-228ENST00000601291 BPHLQ86WA6 291 aaPredicted RBP21.31■■□□□ 1
IRF3-228ENST00000601291 SAMD14Q8IZD0 417 aaPredicted RBP21.31■■□□□ 1
IRF3-228ENST00000601291 OR8J3Q8NGG0 315 aa21.31■■□□□ 1
IRF3-228ENST00000601291 CLPTM1LQ96KA5 538 aa21.31■■□□□ 1
IRF3-228ENST00000601291 CSF3RQ99062 836 aa21.31■■□□□ 1
IRF3-228ENST00000601291 SH3GL1Q99961 368 aa21.31■■□□□ 1
IRF3-228ENST00000601291 SLC7A5P2Q9GIP4 190 aa21.31■■□□□ 1
IRF3-228ENST00000601291 NANOGQ9H9S0 305 aa21.31■■□□□ 1
IRF3-228ENST00000601291 ACSS1Q9NUB1 689 aaPredicted RBP21.31■■□□□ 1
IRF3-228ENST00000601291 VAPAQ9P0L0 249 aa21.31■■□□□ 1
IRF3-228ENST00000601291 AKAP7Q9P0M2 348 aaPredicted RBP21.31■■□□□ 1
IRF3-228ENST00000601291 TMEM181Q9P2C4 612 aa21.31■■□□□ 1
IRF3-228ENST00000601291 VPS4AQ9UN37 437 aa21.31■■□□□ 1
IRF3-228ENST00000601291 PCDHB14Q9Y5E9 798 aa21.31■■□□□ 1
IRF3-228ENST00000601291 PCDHGA1Q9Y5H4 931 aa21.31■■□□□ 1
IRF3-228ENST00000601291 H0YHG0 523 aa21.31■■□□□ 1
IRF3-228ENST00000601291 DSCR3O14972 297 aa21.31■■□□□ 1
IRF3-228ENST00000601291 DNAJB6O75190 326 aa21.31■■□□□ 1
IRF3-228ENST00000601291 C6orf47O95873 294 aa21.31■■□□□ 1
IRF3-228ENST00000601291 RNH1P13489 461 aaKnown RBP21.31■■□□□ 1
IRF3-228ENST00000601291 ALAS2P22557 587 aa21.31■■□□□ 1
IRF3-228ENST00000601291 CCKBRP32239 447 aa21.31■■□□□ 1
IRF3-228ENST00000601291 FRKP42685 505 aaPredicted RBP21.31■■□□□ 1
IRF3-228ENST00000601291 CDKN2CP42773 168 aa21.31■■□□□ 1
IRF3-228ENST00000601291 PDX1P52945 283 aa21.31■■□□□ 1
IRF3-228ENST00000601291 C16orf72Q14CZ0 275 aa21.31■■□□□ 1
IRF3-228ENST00000601291 SAMD4BQ5PRF9 694 aaKnown RBP21.31■■□□□ 1
IRF3-228ENST00000601291 PIP4P1Q86T03 277 aa21.31■■□□□ 1
IRF3-228ENST00000601291 FBXW8Q8N3Y1 598 aa21.31■■□□□ 1
IRF3-228ENST00000601291 TRIML2Q8N7C3 387 aa21.31■■□□□ 1
IRF3-228ENST00000601291 ZFP28Q8NHY6 868 aa21.31■■□□□ 1
IRF3-228ENST00000601291 OR5P2Q8WZ92 322 aa21.31■■□□□ 1
IRF3-228ENST00000601291 UCN3Q969E3 161 aa21.31■■□□□ 1
IRF3-228ENST00000601291 ANKRD27Q96NW4 1050 aa21.31■■□□□ 1
IRF3-228ENST00000601291 BBS4Q96RK4 519 aa21.31■■□□□ 1
IRF3-228ENST00000601291 NEUROD4Q9HD90 331 aa21.31■■□□□ 1
IRF3-228ENST00000601291 HCN3Q9P1Z3 774 aa21.31■■□□□ 1
IRF3-228ENST00000601291 ABCD2Q9UBJ2 740 aa21.31■■□□□ 1
IRF3-228ENST00000601291 ZNF282Q9UDV7 671 aaPredicted RBP21.31■■□□□ 1
IRF3-228ENST00000601291 CES1P1Q9UKY3 287 aa21.31■■□□□ 1
IRF3-228ENST00000601291 MRPS33Q9Y291 106 aaKnown RBP21.31■■□□□ 1
IRF3-228ENST00000601291 ZNF780BQ9Y6R6 833 aa21.31■■□□□ 1
IRF3-228ENST00000601291 A0A1B0GX78 115 aa21.3■■□□□ 1
IRF3-228ENST00000601291 BLACEA4D250 179 aa21.3■■□□□ 1
IRF3-228ENST00000601291 EFCAB7A8K855 629 aa21.3■■□□□ 1
IRF3-228ENST00000601291 AGRPO00253 132 aa21.3■■□□□ 1
IRF3-228ENST00000601291 CIB2O75838 187 aa21.3■■□□□ 1
IRF3-228ENST00000601291 GSNP06396 782 aa21.3■■□□□ 1
IRF3-228ENST00000601291 ZCCHC18P0CG32 403 aa21.3■■□□□ 1
IRF3-228ENST00000601291 MANFP55145 182 aaKnown RBP21.3■■□□□ 1
IRF3-228ENST00000601291 PCBP4P57723 403 aaKnown RBP21.3■■□□□ 1
IRF3-228ENST00000601291 ZNF621Q6ZSS3 439 aa21.3■■□□□ 1
IRF3-228ENST00000601291 PPP1R3BQ86XI6 285 aa21.3■■□□□ 1
IRF3-228ENST00000601291 TMEM126BQ8IUX1 230 aa21.3■■□□□ 1
IRF3-228ENST00000601291 DTWD1Q8N5C7 304 aa21.3■■□□□ 1
IRF3-228ENST00000601291 METTL27Q8N6F8 245 aaPredicted RBP21.3■■□□□ 1
IRF3-228ENST00000601291 GOT1L1Q8NHS2 421 aaPredicted RBP21.3■■□□□ 1
IRF3-228ENST00000601291 TAS2R9Q9NYW1 312 aa21.3■■□□□ 1
IRF3-228ENST00000601291 SLC25A37Q9NYZ2 338 aa21.3■■□□□ 1
IRF3-228ENST00000601291 DHCR7Q9UBM7 475 aaKnown RBP21.3■■□□□ 1
IRF3-228ENST00000601291 TRBV5-3A0A0A0MS03 114 aa21.29■■□□□ 1
IRF3-228ENST00000601291 TMX2-CTNND1H3BSU7 103 aa21.29■■□□□ 1
IRF3-228ENST00000601291 CYR61O00622 381 aa21.29■■□□□ 1
IRF3-228ENST00000601291 PDE5AO76074 875 aa21.29■■□□□ 1
IRF3-228ENST00000601291 ABCB1P08183 1280 aaPredicted RBP21.29■■□□□ 1
IRF3-228ENST00000601291 HOXB9P17482 250 aaPredicted RBP21.29■■□□□ 1
IRF3-228ENST00000601291 PTPN6P29350 595 aa21.29■■□□□ 1
IRF3-228ENST00000601291 HBA1P69905 142 aa21.29■■□□□ 1
IRF3-228ENST00000601291 SIM1P81133 766 aaPredicted RBP21.29■■□□□ 1
IRF3-228ENST00000601291 IL11RAQ14626 422 aa21.29■■□□□ 1
IRF3-228ENST00000601291 MLC1Q15049 377 aa21.29■■□□□ 1
IRF3-228ENST00000601291 TRIP6Q15654 476 aaKnown RBP21.29■■□□□ 1
IRF3-228ENST00000601291 SPATS1Q496A3 300 aa21.29■■□□□ 1
IRF3-228ENST00000601291 GTDC1Q4AE62 458 aa21.29■■□□□ 1
IRF3-228ENST00000601291 RUNDC3AQ59EK9 446 aa21.29■■□□□ 1
IRF3-228ENST00000601291 PIGGQ5H8A4 983 aa21.29■■□□□ 1
IRF3-228ENST00000601291 FAM180BQ6P0A1 224 aa21.29■■□□□ 1
IRF3-228ENST00000601291 PGM2L1Q6PCE3 622 aa21.29■■□□□ 1
IRF3-228ENST00000601291 MSRB3Q8IXL7 192 aa21.29■■□□□ 1
IRF3-228ENST00000601291 SLC15A3Q8IY34 581 aa21.29■■□□□ 1
IRF3-228ENST00000601291 TANKQ92844 425 aa21.29■■□□□ 1
IRF3-228ENST00000601291 TMEM125Q96AQ2 219 aa21.29■■□□□ 1
IRF3-228ENST00000601291 PHF12Q96QT6 1004 aa21.29■■□□□ 1
IRF3-228ENST00000601291 STRADBQ9C0K7 418 aa21.29■■□□□ 1
IRF3-228ENST00000601291 OCIAD1Q9NX40 245 aa21.29■■□□□ 1
IRF3-228ENST00000601291 AP3M1Q9Y2T2 418 aa21.29■■□□□ 1
IRF3-228ENST00000601291 CSNK2A2P19784 350 aaPredicted RBP21.28■■□□□ 1
IRF3-228ENST00000601291 RABL3Q5HYI8 236 aa21.28■■□□□ 1
IRF3-228ENST00000601291 C6orf163Q5TEZ5 329 aa21.28■■□□□ 1
IRF3-228ENST00000601291 PRAMEF17Q5VTA0 474 aa21.28■■□□□ 1
IRF3-228ENST00000601291 OR4K14Q8NGD5 310 aa21.28■■□□□ 1
IRF3-228ENST00000601291 CMKLR1Q99788 373 aa21.28■■□□□ 1
IRF3-228ENST00000601291 THUMPD3Q9BV44 507 aaKnown RBP21.28■■□□□ 1
IRF3-228ENST00000601291 SLAMF7Q9NQ25 335 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms